Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_P02
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 90 2e-18
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 79 5e-15
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 78 9e-15
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 69 5e-12
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 57 1e-08
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 37 0.020
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z82259-6|CAB97264.1| 339|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70034-7|CAA93856.1| 855|Caenorhabditis elegans Hypothetical pr... 29 4.1
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 29 4.1
Z92812-9|CAM84813.1| 338|Caenorhabditis elegans Hypothetical pr... 29 5.4
U80028-7|AAG23984.1| 370|Caenorhabditis elegans Serpentine rece... 29 5.4
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 28 7.1
AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transport... 28 9.4
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 89.8 bits (213), Expect = 2e-18
Identities = 48/190 (25%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Frame = +2
Query: 263 FQNR-KLEHPNSDVRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVY 439
FQ+R E+ + ++F +++K+ LG+G+L++P AFK++G +G+ T+++ IC +C+
Sbjct: 39 FQDRLPTENSLTPEQAFIHMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICLICLYCMR 98
Query: 440 LLVKTSQDVSRVAKVPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAV 619
+V + V + YA + GP +++ + ++ M + LG C V
Sbjct: 99 QVVFAAHFVCNRNGRDLIDYANIMRGAVEMGPPWIKRNGYFFKQLVNVNMFISQLGFCCV 158
Query: 620 YVILLVESVQQIVDYFYADNGI--NETMYCLMFLVPILIFTQIKNLKYLXPFSGFANILL 793
Y + + ++++ D+F + I ++ ++ L+ L+P+L I+ L L PF+ AN++
Sbjct: 159 YFVFMADNLE---DFFNNNTSIHLSKAVWMLLLLIPMLSICSIRRLSILAPFAMAANVVY 215
Query: 794 VLTXLICLYY 823
V+ + L++
Sbjct: 216 VVAVAVVLFF 225
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 80.2 bits (189), Expect = 2e-15
Identities = 46/186 (24%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Frame = +2
Query: 278 LEHPNSDVRS-FA--NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLV 448
LEH + S FA NL+K LG+G ++P AFK +G + G+ ++LG++C C+ LV
Sbjct: 14 LEHYKKAISSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLV 73
Query: 449 KTSQDVSRVAKVPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVI 628
K + +S+V + L Y +RK + SR ++ ++ LG C + I
Sbjct: 74 KCAGYLSKVNQSAPLDYGNMAYKATQASYTPIRKLAPVSRALVNSSLCILQLGICCCFYI 133
Query: 629 LLVESVQQIVDYFYADNGINETMYCLMFLVPILIFTQIKNLKYLXPFSGFANILLVLTXL 808
+V + +++++ D T++ M L ++ + +++ L S N L+++
Sbjct: 134 FVVYHLHELLEFVMNDVPSRATLF-PMVLPAFILLVSLSSMRALSLVSLGGNFLMLIALA 192
Query: 809 ICLYYI 826
+ ++ +
Sbjct: 193 VIMFQL 198
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 78.6 bits (185), Expect = 5e-15
Identities = 40/171 (23%), Positives = 85/171 (49%)
Frame = +2
Query: 314 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL 493
NL+K LG+G ++P AFK +G + G+ ++LG++C C+ LVK + +S+V + L
Sbjct: 84 NLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQSAPL 143
Query: 494 GYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYA 673
Y +RK + SR ++ ++ LG C + I +V + +++++
Sbjct: 144 DYGNMAYKATQASYTPIRKLAPVSRALVNSSLCILQLGICCCFYIFVVYHLHELLEFVMN 203
Query: 674 DNGINETMYCLMFLVPILIFTQIKNLKYLXPFSGFANILLVLTXLICLYYI 826
D T++ M L ++ + +++ L S N L+++ + ++ +
Sbjct: 204 DVPSRATLF-PMVLPAFILLVSLSSMRALSLVSLGGNFLMLIALAVIMFQL 253
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 77.8 bits (183), Expect = 9e-15
Identities = 39/172 (22%), Positives = 86/172 (50%)
Frame = +2
Query: 302 RSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAK 481
++ +++K +G+G+L++P AFK++G +G+ + IC +C L+ ++ + +
Sbjct: 43 QALIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTRQLIFGQHYITFIKR 102
Query: 482 VPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVD 661
+ YA + + GP +R + ++ M G C VY + + ++++Q D
Sbjct: 103 EQRMDYANVMRSAVELGPAWIRGHGYLFKQMVNINMFVAQFGFCCVYFVFMADNLKQFFD 162
Query: 662 YFYADNGINETMYCLMFLVPILIFTQIKNLKYLXPFSGFANILLVLTXLICL 817
+ + I++ + + L+PI I+ LK L P + AN + ++ +I L
Sbjct: 163 QTSSIH-ISQAGWIALLLIPISALCTIRELKALAPLAAVANFVYIIAVVIVL 213
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 68.5 bits (160), Expect = 5e-12
Identities = 42/162 (25%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = +2
Query: 314 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL 493
N + +G G ++ +FK AG G+ I+G++ + ++ +V SQ +++ SL
Sbjct: 71 NFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQYLAKSNGDQSL 130
Query: 494 GYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYA 673
Y E EA + RK + ++I I+ + LG V+++ VE V +I ++F A
Sbjct: 131 DYGEMAEAAMQNSYKWARKHGKLAKIVINACLLAFQLGVITVFMVFAVEHVIEIWEFF-A 189
Query: 674 DNG--INETMYCLMFLVPILIFTQIKNLKYLXPFSGFANILL 793
D+ ++ + LM+ VP ++ I ++K L F N+++
Sbjct: 190 DSPPPFSKCVMILMYFVPQMLLNFIGHMKLLTILCLFGNVII 231
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 57.2 bits (132), Expect = 1e-08
Identities = 41/195 (21%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Frame = +2
Query: 236 DVELNTYDPFQNRKLEHPNSDVRS--------FANLLKSSLGSGILAMPAAFKNAGTIVG 391
D E+ YD + RK + VR N + +G G ++ +FK AG G
Sbjct: 9 DTEIQNYDSIEFRKNAGGSIVVRKTGISATSGLINFVCGMMGPGCFSLAVSFKQAGLWGG 68
Query: 392 IFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGYAETVEAVFATGPQTLRKFSRASRI 571
I+G + + ++ +V SQ +S L Y E ++ +K+ + +++
Sbjct: 69 FASVFIIGGLSLYSMHKIVNCSQFLSEKKGDQKLDYGEMAKSAMENSYGWAKKYGKIAKV 128
Query: 572 FIDWAMAFTILGACAVYVILLVESVQQIVDYFY-ADNGINETMYCLMFLVPILIFTQIKN 748
++ + LG V +I VE + +I + + ++ + LM+ VP ++F I +
Sbjct: 129 VVNTCLLAFQLGVITVSMIFAVEHIIEIWQFIAGSPPPFSKIVLILMYFVPQMLFNLIGH 188
Query: 749 LKYLXPFSGFANILL 793
++ + S N+++
Sbjct: 189 IRIITFLSLCGNVII 203
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/139 (19%), Positives = 62/139 (44%)
Frame = +2
Query: 317 LLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLG 496
++ + G G++A+P A + G + G F ++ +CT+ LL + + + P
Sbjct: 20 IVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTYTGILLAENWTILQEL--YPE-- 75
Query: 497 YAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYAD 676
Y + + LR F+ + T G V+V+L ++ + ++ +A+
Sbjct: 76 YRDHCRKPYPA--MGLRAIGPKFAHFVSAMLQVTQFGTAVVFVLLAAKNGENML---HAN 130
Query: 677 NGINETMYCLMFLVPILIF 733
G + + ++ +V +L+F
Sbjct: 131 FGTHVSFCYMILIVGLLVF 149
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 317 LLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVK 451
++ +G G++AMP AFK +G +GI + + + YLL K
Sbjct: 53 IIADMVGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLLGK 97
>Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical
protein C07E3.8 protein.
Length = 294
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 145 FHVIRVCHFPLKYYQHWHFYFFLLQFV 65
F +RV ++ ++ YQ WH++FFL V
Sbjct: 24 FCTVRVNNWKIEIYQLWHYFFFLKDVV 50
>Z82259-6|CAB97264.1| 339|Caenorhabditis elegans Hypothetical
protein C28D4.7 protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/80 (32%), Positives = 36/80 (45%)
Frame = +2
Query: 242 ELNTYDPFQNRKLEHPNSDVRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYI 421
+LN F E PN + NLL+ G G A+ N G ++G FG +I+ Y
Sbjct: 192 DLNLDGIFLKNATEAPNMYIVKLLNLLRDPEGFG----KVAYDNNGKVIG-FGNVII-YP 245
Query: 422 CTHCVYLLVKTSQDVSRVAK 481
CV L D S+VA+
Sbjct: 246 SGECV--LTPLYADDSKVAQ 263
>Z70034-7|CAA93856.1| 855|Caenorhabditis elegans Hypothetical
protein C18E9.7 protein.
Length = 855
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 158 TAVITGNGIYPSTISINTINPKNKDNDVELNTYD 259
TA I + +YP IS N+IN D+D E +D
Sbjct: 478 TAPIISSTVYPGQISSNSININFGDSDPEQGRFD 511
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 347 LAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGY 499
L P + + IF +I CTH + L+ +SQ S ++ + GY
Sbjct: 298 LLAPGVYNILNQLASIFSMLITLNSCTHLIICLIMSSQYRSTTIQIFTCGY 348
>Z92812-9|CAM84813.1| 338|Caenorhabditis elegans Hypothetical
protein T03E6.9 protein.
Length = 338
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 617 VYVILLVESVQQIVDYFYADNGINETMYCLMFLVPILIFTQIKNLKYLXP 766
VY+I ++ V I FYAD I+ T Y L +L+ I I N+ ++ P
Sbjct: 259 VYIIFIIVPVAVISTLFYAD--IHITDYGLPYLLMICSQGTINNMIHIVP 306
>U80028-7|AAG23984.1| 370|Caenorhabditis elegans Serpentine
receptor, class w protein124 protein.
Length = 370
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 329 SLGSGILAMPA-AFKNAGTIVGIFGTIILGY-ICTHCVYLLVKTSQDVSRVAKVPSLGYA 502
S+GS L M + +N G T+++ CTH + L+ +SQ S V S GY
Sbjct: 290 SVGSAWLFMSSPGVQNILNFFGYMFTVLISVNACTHLIVCLIVSSQYRSTAISVLSCGYI 349
Query: 503 ETV 511
V
Sbjct: 350 SQV 352
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 567 GYLSTGQWLLLFLALVLYMSFYLWSQFSRSSIISTQTMASTKQCTALCS*YPFLF 731
G +T Q LL++L ++L + YL+ RSSI+ T+Q T + Y FLF
Sbjct: 105 GVPNTFQILLVWLMVLLTVGSYLYFFEGRSSILVQNKFRITRQKTRVI--YYFLF 157
>AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transporter
family protein 2 protein.
Length = 1551
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 572 FIDWAMAFTILGACAVYVILLVESVQQIVDYFYADNGINETMYCLMFLVPIL-IFTQIKN 748
FI W + +L +V +I ++ V +I DY T Y L+ V IL +F+ I
Sbjct: 116 FISWGLISLVLNFISVLIISIISKVAKIFDY---------TDYTLLLFVLILFLFSSIAM 166
Query: 749 LKYLXPFSGFANILLVLTXLI 811
+ ANI T ++
Sbjct: 167 SIFFSTLFTNANIATAATCVL 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,244,093
Number of Sequences: 27780
Number of extensions: 386198
Number of successful extensions: 1206
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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