Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_O24
(699 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0826 + 11569961-11570301,11572220-11572454 99 2e-21
10_08_0543 - 18649894-18650233,18651446-18651981 97 2e-20
02_05_0089 - 25715637-25716333,25716481-25717238 97 2e-20
02_05_1047 + 33745656-33745964 94 8e-20
10_08_0544 - 18655186-18655567,18656835-18657151 94 1e-19
03_02_0079 + 5485090-5485238,5486066-5486137,5486764-5486840,548... 38 0.001
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 34 0.12
08_01_0618 - 5394841-5395036,5395179-5395244,5395727-5395769,539... 30 1.5
03_05_0260 + 22468243-22468292,22469125-22469125,22469130-224692... 30 1.5
01_06_0903 + 32862551-32864752,32865341-32865535,32866219-328665... 29 3.5
11_02_0038 - 7631462-7634428,7635975-7636250 28 8.2
04_01_0050 - 536390-537231,538108-538375 28 8.2
>03_02_0826 + 11569961-11570301,11572220-11572454
Length = 191
Score = 99 bits (238), Expect = 2e-21
Identities = 45/99 (45%), Positives = 66/99 (66%)
Frame = +3
Query: 210 DLTVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV 389
++T+ +L YDG P +L+A+ G ++DVTRG+ FYGP GPYS FAG+DATR LA +
Sbjct: 81 EITLEQLAAYDGKDPAKPILIAIRGQVYDVTRGRLFYGPQGPYSLFAGRDATRALAL--M 138
Query: 390 AASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRL 506
+ D D+ LG DE+ ++WE++F+E+Y VG L
Sbjct: 139 SFDPIDLTGDLDGLGPDELEVLQDWEDKFKERYPTVGHL 177
>10_08_0543 - 18649894-18650233,18651446-18651981
Length = 291
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/102 (43%), Positives = 70/102 (68%)
Frame = +3
Query: 210 DLTVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV 389
++T EL +YDG+ P+ +L+A+ G I+DV++ + FYGPGGPY+ FAGKDA+R LA ++
Sbjct: 146 EITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYALFAGKDASRALA--KM 203
Query: 390 AASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRLLKL 515
+ D DD+S L E+++ ++WE +F KY VG + K+
Sbjct: 204 SFEPQDLTDDISGLSLLELSALQDWEYKFSSKYVKVGTIKKV 245
>02_05_0089 - 25715637-25716333,25716481-25717238
Length = 484
Score = 96.7 bits (230), Expect = 2e-20
Identities = 46/102 (45%), Positives = 69/102 (67%)
Frame = +3
Query: 210 DLTVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV 389
++T EL+ YDG+ P+ +L+A+ G I+DVT+ + FYGPGGPY+ FAG+DA+R LA ++
Sbjct: 220 EVTEEELRVYDGSDPNKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGRDASRALA--KM 277
Query: 390 AASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRLLKL 515
+ +D DVS LG E+ + EWE +F KY VG + K+
Sbjct: 278 SFELDDLTGDVSGLGPIELEALHEWEGKFMSKYVKVGTIKKI 319
>02_05_1047 + 33745656-33745964
Length = 102
Score = 94.3 bits (224), Expect = 8e-20
Identities = 41/99 (41%), Positives = 65/99 (65%)
Frame = +3
Query: 210 DLTVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV 389
+LT A+L+ YDG+ P + ++V G ++DVT G+ FYGPGG Y+ FAG++A+R L G++
Sbjct: 4 ELTAAQLRAYDGSDPSKPIYVSVRGKVYDVTSGRGFYGPGGAYAVFAGREASRAL--GKM 61
Query: 390 AASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRL 506
+ + D D+S L E+ +WE +F+ KY +V RL
Sbjct: 62 SKDDADVSGDLSGLSDKELGVLADWETKFQAKYPVVARL 100
>10_08_0544 - 18655186-18655567,18656835-18657151
Length = 232
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/101 (43%), Positives = 68/101 (67%)
Frame = +3
Query: 210 DLTVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV 389
+++ EL++YDG+ P +L+A+ G I+DVT+ + FYGPGGPY+ FAGKDA+R LA ++
Sbjct: 73 EVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALA--KM 130
Query: 390 AASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRLLK 512
+ D D+S LG E+ + ++WE +F KY VG + K
Sbjct: 131 SFEPQDLTGDISGLGPFELDALQDWEYKFMGKYVKVGTVKK 171
>03_02_0079 +
5485090-5485238,5486066-5486137,5486764-5486840,
5486946-5486989,5487583-5487639,5487640-5487686,
5488010-5488184,5489501-5489662,5489845-5489883
Length = 273
Score = 37.5 bits (83), Expect(2) = 0.001
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 288 IFDVTRGKRFYGPGGPYSAFAG 353
+FDVT+GK YGPGG Y FAG
Sbjct: 52 VFDVTKGKSNYGPGGGYHHFAG 73
Score = 22.2 bits (45), Expect(2) = 0.001
Identities = 10/51 (19%), Positives = 27/51 (52%)
Frame = +3
Query: 357 DATRGLATGQVAASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRLL 509
D+ +GL++ + A + + + S ++ S +W + + E+Y G+++
Sbjct: 105 DSLQGLSSMEYYACVFSKKGIIGFVTSFQVNSIVDWRKFYFERYIFAGKIV 155
>02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 330 GPYSAFAGKDATRGLAT-GQVAASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRL 506
G Y AG+ RGL G V DE + SDL + + E QFR Y ++ L
Sbjct: 856 GEYIQMAGRAGRRGLDNIGTVIVMCRDEIPEESDLKNLIVGKPTRLESQFRLTYTMILHL 915
Query: 507 LKLGE 521
L++ E
Sbjct: 916 LRVEE 920
>08_01_0618 -
5394841-5395036,5395179-5395244,5395727-5395769,
5396119-5396238,5396653-5396731,5396910-5397177,
5397262-5397305,5397431-5397502,5397756-5397825,
5397929-5397999
Length = 342
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 405 DEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRLLKLGETPK 530
DE+D SD G DE E E++ RE+ I RL+ G+T K
Sbjct: 62 DEFD--SDFGEDESEPDDEPEKEVRERLPIKKRLIFPGKTMK 101
>03_05_0260 +
22468243-22468292,22469125-22469125,22469130-22469285,
22469416-22469919
Length = 236
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -3
Query: 514 NLRRRPTMSYFSLNCSSHSLAEAISSEPRSLTSSYSSFSDAATCPVA 374
N +RR + S F+ NCS SL A S+ S T S S CP A
Sbjct: 161 NNKRRES-SPFTSNCSGGSLTTATSTSTSSSTDSDGSLRQPPPCPRA 206
>01_06_0903 +
32862551-32864752,32865341-32865535,32866219-32866523,
32866664-32866849,32867137-32867314,32867548-32867574
Length = 1030
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 359 VFTSKRRVWASRSIKSLASSNIKYNSIHSQKNSSVRLS 246
+F S RR W S+++ +LAS Y+S+ VR++
Sbjct: 218 LFLSSRRAWISQALTTLASDLTSYSSVLCDVAKIVRVT 255
>11_02_0038 - 7631462-7634428,7635975-7636250
Length = 1080
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 18 SRTQXVYKMADETNSPTVWDELTSPLNL 101
+ T+ Y M D TN V+DEL P NL
Sbjct: 804 THTKESYTMEDITNIENVFDELKPPCNL 831
>04_01_0050 - 536390-537231,538108-538375
Length = 369
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 414 DDVSDLGSDEIASAKEWEEQ 473
DDV GSD AS EWEE+
Sbjct: 333 DDVDSSGSDVYASLCEWEEE 352
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,084,148
Number of Sequences: 37544
Number of extensions: 289133
Number of successful extensions: 860
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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