Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_O21
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 44 1e-04
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 42 4e-04
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 42 8e-04
01_03_0126 + 12741397-12743022 34 0.12
07_03_0898 - 22403337-22404950 34 0.15
11_01_0557 + 4394754-4396040 32 0.47
07_03_0896 + 22373348-22374946 32 0.62
07_03_0899 + 22421038-22422642 31 0.82
01_01_0920 + 7264498-7264573,7264705-7264745,7265339-7265408,726... 31 1.1
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 30 1.9
02_04_0657 + 24786717-24786924,24786925-24786965,24787379-247875... 30 2.5
02_02_0448 + 10370493-10370568,10370687-10370727,10372372-103724... 30 2.5
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439... 29 3.3
01_07_0106 - 41107673-41107942,41108362-41108574,41108877-411090... 29 3.3
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 29 4.4
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931 29 4.4
10_08_0365 + 17224777-17224852,17224949-17224989,17225175-172252... 29 5.8
04_04_0503 - 25701050-25701343,25701431-25701528,25701629-257016... 29 5.8
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 29 5.8
10_08_1053 - 22575281-22575409,22575516-22575653,22575786-225758... 28 7.6
02_05_1170 + 34663853-34663928,34664038-34664078,34664317-346643... 28 7.6
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/115 (20%), Positives = 53/115 (46%)
Frame = +3
Query: 345 YPYNEAINLAGNGRYSIGXXXXXXXXXXXXXIDMFGFSVIVTGATCDFQLDLSQTNILLS 524
Y +EA+ G G++ + +++ S + ++ + ++L S
Sbjct: 199 YTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLSS 258
Query: 525 MPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVASAFAPNWVFMAVMKFI 689
+ F G + A WG+++D GR+ LL + + + SAF+PN+ + ++F+
Sbjct: 259 VVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNYSCLLALRFL 313
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +3
Query: 345 YPYNEAINLAGNGRYSIGXXXXXXXXXXXXXIDMFGFSVIVTGATCDFQLDLSQTNILLS 524
Y ++A+ +G GRY I ++M S + +++L Q +++ S
Sbjct: 10 YSVDDALLSSGFGRYQILILSYAGVGLIAEAMEMMLLSFVGPSVQLEWKLTSHQESMITS 69
Query: 525 MPFVGPIAMAYPWGYIADTKGRK 593
+ FVG + AY WG ++D GR+
Sbjct: 70 IVFVGMLIGAYTWGVVSDNYGRR 92
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/100 (20%), Positives = 48/100 (48%)
Frame = +3
Query: 345 YPYNEAINLAGNGRYSIGXXXXXXXXXXXXXIDMFGFSVIVTGATCDFQLDLSQTNILLS 524
Y +EA+ G G++ ++M S + +++L +++ S
Sbjct: 32 YTVDEALISMGFGKFQAFVLAYSGMAKISEAMEMMLLSFVGQSVQAEWELSAQAESLITS 91
Query: 525 MPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVAS 644
+ FVG + AY WG ++D GR+ +++ ++ ++++ +S
Sbjct: 92 VVFVGMLVGAYSWGIVSDNYGRRQAVMPSLGWRWLLAFSS 131
>01_03_0126 + 12741397-12743022
Length = 541
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Frame = +3
Query: 516 LLSMP----FVGPIAMAYPWGYIADTK-GRKTSLLIAMWGSFIVSVASAFAPN-WVFMAV 677
L+S+P F G +A + +ADT GR+ LL+++ + + +AF+PN WV+ A
Sbjct: 124 LVSLPASSFFAGNLAGGFLLATLADTHLGRRKMLLLSLVTMSVAAALTAFSPNVWVYSA- 182
Query: 678 MKFIS 692
++F+S
Sbjct: 183 LRFVS 187
>07_03_0898 - 22403337-22404950
Length = 537
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Frame = +3
Query: 516 LLSMP----FVGPIAMAYPWGYIADTK-GRKTSLLIAMWGSFIVSVASAFAPN-WVFMAV 677
L+S+P F G +A + +ADT GR+ L++++ + V +AF+PN WV+ A
Sbjct: 118 LVSLPASSFFAGNLAGGFLLTTLADTHLGRRKMLVLSLATMSVAGVLTAFSPNVWVY-AA 176
Query: 678 MKFIS 692
++F+S
Sbjct: 177 LRFVS 181
>11_01_0557 + 4394754-4396040
Length = 428
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 438 IDMFGFSVIVTGATCDFQLDLSQTNILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIA-- 611
I+ GFS+ T A + + ++LSM + G + P G+ A G + LL++
Sbjct: 22 IERVGFSIAYTVAADAVGTNQANKGMILSMFYYGYVLSQIPGGWAAQRLGGRLVLLLSFV 81
Query: 612 MWGSFIVSVASAFAPNWVFMAVM 680
+W S V PN V + V+
Sbjct: 82 LWSSICAVV--PLDPNRVILLVL 102
>07_03_0896 + 22373348-22374946
Length = 532
Score = 31.9 bits (69), Expect = 0.62
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Frame = +3
Query: 516 LLSMP----FVGPIAMAYPWGYIADTK-GRKTSLLIAMWGSFIVSVASAFAPN-WVFMA- 674
L+S+P F G +A + +AD+ GR+ LL+++ + V +AF+PN W + A
Sbjct: 117 LVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLVSLASMSVAGVLTAFSPNVWAYAAL 176
Query: 675 --VMKFISTSFCSCAQSVTYTLLGESSSET 758
V F + +CA ++ L+G+ +T
Sbjct: 177 RFVCGFGRSMVGTCALVLSTELVGKRWRDT 206
>07_03_0899 + 22421038-22422642
Length = 534
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Frame = +3
Query: 516 LLSMP----FVGPIAMAYPWGYIADTK-GRKTSLLIAMWGSFIVSVASAFAPN-WVFMAV 677
L+S+P F G +A + +ADT GR+ L++++ + V + F+PN WV+ A
Sbjct: 126 LVSLPASSFFAGNLAGGFLLTTLADTLLGRRKMLVLSLVTMSVAGVLTVFSPNVWVY-AA 184
Query: 678 MKFISTSFC 704
++F+ FC
Sbjct: 185 LRFV-CGFC 192
>01_01_0920 +
7264498-7264573,7264705-7264745,7265339-7265408,
7265500-7265648,7266143-7266238,7266326-7266396,
7266510-7266571,7266651-7266714,7267608-7267692,
7267777-7267903,7268016-7268080,7268739-7268796,
7268927-7269066,7269624-7269693,7269910-7269981,
7270188-7270234,7270468-7270566
Length = 463
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Frame = +3
Query: 282 GFGRKSSTVWTVS-------KPSNDERHYPYNEAINLAGNGRYS 392
G GRK++ V+ + + S RH PY E NL G RY+
Sbjct: 137 GLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYA 180
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 531 FVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVASAFAPNWVFMAVM 680
F+G A PWG AD GRK ++I++ + + + + +MA++
Sbjct: 94 FLGRTISAVPWGIFADKYGRKPCIVISILSVIVFNTLFGLSTTY-WMAIV 142
>02_04_0657 +
24786717-24786924,24786925-24786965,24787379-24787521,
24787597-24787774,24788054-24788123,24788197-24788345,
24788491-24788586,24789213-24789283,24789879-24789940,
24790175-24790238,24790326-24790410,24790515-24790641,
24790714-24790775,24790863-24790923,24790987-24791147,
24791355-24791648
Length = 623
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Frame = +3
Query: 282 GFGRKSSTVWTV----SKPSND---ERHYPYNEAINLAGNGRYS 392
G GRK+S V+ + +K D +H PY E NL G RY+
Sbjct: 288 GLGRKASQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYA 331
>02_02_0448 +
10370493-10370568,10370687-10370727,10372372-10372441,
10372530-10372678,10373177-10373272,10373347-10373417,
10373547-10373608,10373797-10373860,10374107-10374191,
10374281-10374407,10374494-10374567,10374804-10374858,
10374961-10375085,10375297-10375452
Length = 416
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Frame = +3
Query: 282 GFGRKSSTVWTVS-------KPSNDERHYPYNEAINLAGNGRYS 392
G GRK++ V+ + + + RH PY E NL G RY+
Sbjct: 137 GLGRKANQVYIIDFGLAKRYRDATTNRHIPYRENKNLTGTARYA 180
>04_04_0345 -
24542869-24543540,24543725-24543805,24543845-24543910,
24543991-24544098,24545101-24545436,24545516-24545586,
24546105-24546252
Length = 493
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 516 LLSMPFVGPIAMAYPWGYIADTKGRKTSLLIA 611
++SM VG I A G+I DT GR+ S L+A
Sbjct: 76 IVSMALVGAIIGAAGGGWINDTYGRRKSTLVA 107
>01_07_0106 -
41107673-41107942,41108362-41108574,41108877-41109041,
41109431-41109649,41110205-41110324,41110427-41110489,
41111034-41111606,41111691-41111858,41112414-41112495,
41112667-41112743,41113031-41113101,41114315-41114363
Length = 689
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Frame = -1
Query: 398 TDAVPSVTSQINSFVIRVMPFI--ITGLADCPHCGTLPSKAIVVT---LISVSILGTHYN 234
T++ P T + V + PF + L + P TLP A+V++ ++V +
Sbjct: 282 TESPPPPTDTSSITVESLHPFEQNLASLKESPLEETLPKAAVVLSEQGAVNVQSRQLCHV 341
Query: 233 TEETQTL----NGIKFKLHEIILN 174
TE+ Q L NG++ KL EIIL+
Sbjct: 342 TEDVQNLKSKLNGLEVKLEEIILS 365
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 483 DFQLDLSQTNILLSMPFVGPIAMAYPWGYIADTKGRK 593
D QL LS+ ++ S+ +G + A G++AD GRK
Sbjct: 55 DLQLSLSEYSVFGSIITIGAMIGAVASGHLADISGRK 91
>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
Length = 478
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Frame = +3
Query: 483 DFQLDLSQTNILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVASAFAPNW 662
D L ++ +L V +A G+ ADT GR+ ++++A +F+++ A A +
Sbjct: 61 DMGLSDAEIEVLAGSMNVFMLASILAAGWAADTLGRRGTIVLA--NAFLMAGALAMSLGA 118
Query: 663 VFMAVM--KFISTSFCSCAQSVTYTLLGESSSETFRDSYMLIMTSVLDFXL 809
+ A+M +F+++ A+ V E S + R ++TS+LD +
Sbjct: 119 TYAALMAARFVTSVGVGFARVVAPVYNAEISPASTRG----VLTSLLDMFI 165
>10_08_0365 +
17224777-17224852,17224949-17224989,17225175-17225244,
17225338-17225486,17225940-17226035,17226481-17226551,
17227077-17227138,17227311-17227374,17227463-17227547,
17227631-17227757,17228241-17228374,17228808-17229122
Length = 429
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Frame = +3
Query: 282 GFGRKSSTVWTVS-------KPSNDERHYPYNEAINLAGNGRYS 392
G GRK++ V+ + K +H PY E NL G RY+
Sbjct: 137 GLGRKANQVYIIDYGLAKKYKDLQTHKHIPYRENKNLTGTARYA 180
>04_04_0503 -
25701050-25701343,25701431-25701528,25701629-25701689,
25701772-25701842,25701922-25702048,25702160-25702244,
25702346-25702409,25702732-25702793,25703214-25703284,
25703700-25703795,25703960-25704108,25704196-25704265,
25704483-25704523,25704668-25704743
Length = 454
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Frame = +3
Query: 282 GFGRKSSTVWTV----SKPSND---ERHYPYNEAINLAGNGRYS 392
G GRK++ V+ + +K D +H PY E NL G RY+
Sbjct: 137 GLGRKANQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYA 180
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 471 GATCDFQLDLSQTNILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIA 611
G DF L S+ + S+ +G + A G +AD+ GRKT++ +A
Sbjct: 1015 GIVNDFGLSNSEYGVFGSVLTIGAMIGALTSGRLADSLGRKTTMGLA 1061
>10_08_1053 -
22575281-22575409,22575516-22575653,22575786-22575884,
22576281-22576361,22577171-22577233,22577473-22577520,
22577622-22577990,22578082-22578183,22578290-22578414,
22578500-22578566,22578817-22578895,22578928-22579079,
22579182-22579223
Length = 497
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 570 IADTKGRKTSLLIAMWGSFIVSVASAFAPNWVFMAVMKF 686
IAD GR+ L+++ I ++ +A APN+ M V +F
Sbjct: 109 IADFLGRRRELILSSVSYLIGALLTAAAPNFPIMVVGRF 147
>02_05_1170 +
34663853-34663928,34664038-34664078,34664317-34664386,
34664499-34664647,34664784-34664879,34665406-34665476,
34665637-34665698,34665778-34665841,34665950-34666034,
34666129-34666255,34666381-34666454,34666539-34666599,
34666683-34666771,34666897-34667206,34667763-34667815,
34668299-34668370,34668648-34668914,34669015-34669047,
34669163-34669245,34669522-34669594,34669834-34670170,
34670302-34670633,34670816-34671135,34671261-34671612,
34671691-34671906
Length = 1170
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Frame = +3
Query: 282 GFGRKSSTVWTV----SKPSND---ERHYPYNEAINLAGNGRYS 392
G GRK++ V+ + +K D +H PY E NL G RY+
Sbjct: 137 GLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYA 180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,940,869
Number of Sequences: 37544
Number of extensions: 475828
Number of successful extensions: 1308
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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