Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_O21
         (809 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    24   1.9  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   5.8  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   7.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   7.7  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   7.7  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   7.7  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 562 HGYAIAIGPTNGI 524
           HGYA  +GP  GI
Sbjct: 618 HGYASVVGPVKGI 630


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 688 MNFITAMNTQFGAKALATETIKLPHMAISR 599
           + F+T   T  G    A+  IKLP +A +R
Sbjct: 264 LGFLTFCPTNLGTTVRASVHIKLPKLAANR 293


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/46 (26%), Positives = 17/46 (36%)
 Frame = +3

Query: 228  FSVIMSAQDRYRYKGDDDGFGRKSSTVWTVSKPSNDERHYPYNEAI 365
            F   +  +D     G D G    S T  TVS+     R   Y + +
Sbjct: 1056 FETKLVLEDGITSSGSDSGSSNGSWTAGTVSQQKQKRRMVKYGKLV 1101


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -3

Query: 156 IVKNNCKNNKHSFFFKLLKLTSYCLTIFRCAHVASYEREWR 34
           +V+  C+N  H   F +L    YC +       A + +++R
Sbjct: 30  LVRAFCRNCIHPTVFSVLFWLGYCNSAINPCIYALFSKDFR 70


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -3

Query: 156 IVKNNCKNNKHSFFFKLLKLTSYCLTIFRCAHVASYEREWR 34
           +V+  C+N  H   F +L    YC +       A + +++R
Sbjct: 478 LVRAFCRNCIHPTVFSVLFWLGYCNSAINPCIYALFSKDFR 518


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 695 CTDELHNSHEYPVRGKGTGNGDD 627
           C DELH S +     +   NG D
Sbjct: 40  CADELHISEDIATNIQAAKNGAD 62


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 695 CTDELHNSHEYPVRGKGTGNGDD 627
           C DELH S +     +   NG D
Sbjct: 40  CADELHISEDIATNIQAAKNGAD 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,431
Number of Sequences: 438
Number of extensions: 4711
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)