Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_O14
(833 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 54 2e-07
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 44 1e-06
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 50 2e-06
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 45 3e-06
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 49 5e-06
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 42 1e-05
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 41 3e-05
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 45 9e-05
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 44 1e-04
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 41 0.001
06_01_0228 - 1736373-1736721,1739915-1740120,1740513-1740844,174... 32 0.65
09_02_0208 - 5802370-5802963 31 1.5
04_04_0975 + 29836451-29837032 31 1.5
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 30 2.6
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 30 2.6
04_01_0204 + 2467657-2467781,2467955-2468044,2469071-2469169,246... 30 2.6
11_01_0299 - 2241760-2241990,2242958-2243331,2243427-2243754 29 3.5
05_01_0166 + 1145829-1145971,1146211-1146235,1147330-1147425,114... 29 3.5
12_01_1096 + 11494100-11494263,11494489-11494633,11494694-11494741 29 4.6
09_04_0157 - 15195001-15195178,15195298-15195473 29 6.0
08_02_1100 + 24303920-24304001,24304080-24304576,24304745-243048... 29 6.0
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928... 29 6.0
12_02_0842 - 23588826-23589198,23589548-23590203 28 8.0
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 399 SPRCAYCNGPI-LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMF 575
S CA C PI + ++ ++ WH + F C C + E F + +PY ++ Y D F
Sbjct: 254 SRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFF 313
Query: 576 APKCGGCNKPIMENYISALNTQWHP 650
PKC C I N + + HP
Sbjct: 314 HPKCDVCKNFIPTNRNGLIEYRAHP 338
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 231 CNACEKPIV-GQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 407
C C+ PI G+ ++ + WHP+ F C CN+ + F + +PY + Y + F P+
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPK 316
Query: 408 CAYC 419
C C
Sbjct: 317 CDVC 320
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 585 CGGCNKPIMEN-YISALNTQWHPXCFVCKDCXNPVKGKSFYAMEGKPVCPTC 737
C GC PI ++S +++ WHP CF C C P+ F E +P +C
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSC 308
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 44.4 bits (100), Expect(2) = 1e-06
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 213 TPQKGCCNACEKPIVGQ-VITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYH 389
T QK C C K + ++ G +H F C HC L N+ +G PYC+P +
Sbjct: 5 TQQK--CKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFE 62
Query: 390 NLFSPRCAY 416
LF +Y
Sbjct: 63 QLFKETGSY 71
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 90 VYREKRAWQEQYRTNPRQPESASLEHMLGSLRADMSRQGVQTPQKGCCNACEKPIVG-QV 266
+++E ++ + +++ P +P S L L + +R T +K C C K +
Sbjct: 64 LFKETGSYNKSFQS-PAKPASEKLTPELTRSPSKAARMFSGTQEK--CATCSKTAYPLEK 120
Query: 267 ITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAY 416
+T G+ +H F C+H + N+ +G YC+ + LF + +Y
Sbjct: 121 VTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSY 170
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 582 KCGGCNKPIME-NYISALNTQWHPXCFVCKDCXNPVKGKSFYAMEGKPVC 728
KC C K + + +S +H CF C+ C + + ++ ++EG P C
Sbjct: 8 KCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYC 57
Score = 26.2 bits (55), Expect(2) = 1e-06
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 405 RCAYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFA 578
+CA C+ L+K VT + +H F C+ G + +G YC+ + +F
Sbjct: 107 KCATCSKTAYPLEK-VTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFK 165
Query: 579 PK 584
K
Sbjct: 166 EK 167
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 231 CNACEKPIV-GQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 407
C C I G+ ++ +G WHPE F C CNQ + F PY + Y F P+
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPK 617
Query: 408 CAYC 419
C C
Sbjct: 618 CDVC 621
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +3
Query: 408 CAYCNGPI-LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPK 584
CA C+ I + ++ + WH E F C C Q + F PY + Y + F PK
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPK 617
Query: 585 CGGCNKPIMENYISALNTQWHPXCFVCKDCXNPVKGKSFYAMEGKPVCPTCVGVDDDE 758
C C + I N + + HP ++ K C + + ++G P C +C ++ E
Sbjct: 618 CDVCKQFIPTNMNGLIEYRAHPF-WLQKYCPS-------HEVDGTPRCCSCERMEPRE 667
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 44.8 bits (101), Expect(2) = 3e-06
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 231 CNACEKPI-VGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLF 398
C AC+K + ++TA G ++H F C+HC L N+ DG YC+ + LF
Sbjct: 10 CKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTHFEQLF 66
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 231 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 407
C AC+K + + +T G ++H F C+H L T ++ +G YC+ + LF +
Sbjct: 106 CAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEK 165
Query: 408 CAY 416
+Y
Sbjct: 166 GSY 168
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 582 KCGGCNKPI-MENYISALNTQWHPXCFVCKDCXNPVKGKSFYAMEGKPVCPT 734
KC C+K + + ++A +H CF C C + ++ +M+G C T
Sbjct: 9 KCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKT 60
Score = 24.6 bits (51), Expect(2) = 3e-06
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +3
Query: 405 RCAYCNGPILDKCVTALE-KTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAP 581
+CA C + LE +++H F C+ G + +G YC+ + +F
Sbjct: 105 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKE 164
Query: 582 K 584
K
Sbjct: 165 K 165
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 48.8 bits (111), Expect = 5e-06
Identities = 44/168 (26%), Positives = 63/168 (37%), Gaps = 2/168 (1%)
Frame = +3
Query: 231 CNACEKPI-VGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 407
C AC+K + + +TA R +H F C HC L N+ +G YC P + LF
Sbjct: 12 CMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRT 71
Query: 408 CAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKC 587
+ V EKT E+ + F G E+ C
Sbjct: 72 GSLDKSFEGTPKVVKPEKTVENEN--AIKVSSAFA--GTREK-----------------C 110
Query: 588 GGCNKPIME-NYISALNTQWHPXCFVCKDCXNPVKGKSFYAMEGKPVC 728
GCNK + ++ NT +H CF C + ++ A EGK C
Sbjct: 111 VGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYC 158
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 231 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 407
C C K + + +T +H F C H + N+ +G+ YC+ + L +
Sbjct: 110 CVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEK 169
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 405 RCAYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFA 578
+C C+ + +DK +TA + +H F C C ++ +G YCR +FD
Sbjct: 11 KCMACDKTVYLVDK-LTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCR-PHFDQLF 68
Query: 579 PKCGGCNK 602
+ G +K
Sbjct: 69 KRTGSLDK 76
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 42.3 bits (95), Expect(2) = 1e-05
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 231 CNACEKPI-VGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLF 398
CNAC+K + ++TA +H F C+HC L ++ DG YC+ + LF
Sbjct: 10 CNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTHFEQLF 66
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 407
C AC+K + + +T G +H F CAH L ++ +G YC+ + LF
Sbjct: 104 CTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLFKKS 163
Query: 408 CAYCNGPILDKCVTALEKTWHTE 476
+Y N +L A E T +E
Sbjct: 164 GSYDN--LLKPASAAAENTVESE 184
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 582 KCGGCNKPI-MENYISALNTQWHPXCFVCKDCXNPVKGKSFYAMEGKPVCPT 734
KC C+K + + ++A + +H CF C C + S+ +M+G C T
Sbjct: 9 KCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKT 60
Score = 24.6 bits (51), Expect(2) = 1e-05
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 405 RCAYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFA 578
+C C + L+K +T + +H F CA G + +G YC+ ++ +F
Sbjct: 103 KCTACKKTVYPLEK-MTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLF- 160
Query: 579 PKCGGCNKPIMENYISALNT 638
K G + + +A NT
Sbjct: 161 KKSGSYDNLLKPASAAAENT 180
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 41.1 bits (92), Expect(2) = 3e-05
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 231 CNACEKPI-VGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLF 398
C AC+K + ++TA G +H F C+HC L ++ DG YC+ + LF
Sbjct: 10 CTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLF 66
Score = 36.3 bits (80), Expect = 0.030
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 231 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 407
C AC+K + + +T G ++H F C+H L T ++ +G YC+ + LF +
Sbjct: 105 CAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEK 164
Query: 408 CAY 416
+Y
Sbjct: 165 GSY 167
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 582 KCGGCNKPI-MENYISALNTQWHPXCFVCKDCXNPVKGKSFYAMEGKPVCPT 734
KC C+K + + ++A +H CF C C + S+ +M+G C T
Sbjct: 9 KCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60
Score = 24.6 bits (51), Expect(2) = 3e-05
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +3
Query: 405 RCAYCNGPILDKCVTALE-KTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAP 581
+CA C + LE +++H F C+ G + +G YC+ + +F
Sbjct: 104 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFME 163
Query: 582 K 584
K
Sbjct: 164 K 164
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 44.8 bits (101), Expect = 9e-05
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 585 CGGCNKPIME-NYISALNTQWHPXCFVCKDCXNPVK 689
CGGC I +Y+S L WHP CF C C +P++
Sbjct: 114 CGGCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPIR 149
Score = 35.1 bits (77), Expect = 0.069
Identities = 28/114 (24%), Positives = 42/114 (36%)
Frame = +3
Query: 309 CAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCVTALEKTWHTEHFFC 488
C C E+G ++ G Y P RC+ C PI + VT L+ + F
Sbjct: 114 CGGCKHEIGHGHYLSCLGM-YWHPQCF-----RCSSCRHPIREMEVTFLQFSLECLKVFS 167
Query: 489 AQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIMENYISALNTQWHP 650
+ F PY + Y ++ PKC C + I N + + HP
Sbjct: 168 GSDSLLYSVSQFTLLGTDPYHKLCYKELHHPKCDVCLQFIPTNRTGLIEYRAHP 221
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 231 CNACEKPIV-GQVITALGRTWHPEHFTCAHCNQEL 332
C C+ I G ++ LG WHP+ F C+ C +
Sbjct: 114 CGGCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPI 148
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 44.4 bits (100), Expect = 1e-04
Identities = 42/176 (23%), Positives = 67/176 (38%), Gaps = 2/176 (1%)
Frame = +3
Query: 213 TPQKGCCNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYH 389
T QK C++C + + + + A GR +H F C HC L N+ +G YC+P Y
Sbjct: 9 TTQK--CDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYCKPHYD 66
Query: 390 NLFSPRCAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFD 569
+ K +LEK++ + E + G+P + F
Sbjct: 67 QIL-------------KSTGSLEKSFE-------GTSKSAKAEKSNGNKGQPNRFSSMFV 106
Query: 570 MFAPKCGGCNKPIME-NYISALNTQWHPXCFVCKDCXNPVKGKSFYAMEGKPVCPT 734
KC CNK + ++ + +H CF C + + EGK C T
Sbjct: 107 GTQDKCVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKT 162
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 231 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 407
C C K + + + G ++H F C H L N +G+ YC+ + LF +
Sbjct: 112 CVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLFMVK 171
Query: 408 CAYCN 422
+ N
Sbjct: 172 GNFSN 176
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 41.1 bits (92), Expect = 0.001
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 585 CGGCNKPIMEN-YISALNTQWHPXCFVCKDCXNPV 686
C GC PI + ++S +++ WHP CF C C P+
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPI 212
Score = 32.7 bits (71), Expect = 0.37
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Frame = +3
Query: 231 CNACEKPI-VGQVITALGRTWHPEHFTCAHCNQELGTRNF-FERDG-----------RPY 371
C C+ PI G+ ++ + WHP+ F C C++ + +DG + Y
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISEYEIPTNKDGHIEYRAHPFWMQKY 237
Query: 372 CEPDYHNLFSPRCAYC 419
C P + +PRC C
Sbjct: 238 C-PAHETDRTPRCCSC 252
Score = 32.3 bits (70), Expect = 0.49
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 5/122 (4%)
Frame = +3
Query: 408 CAYCNGPI-LDKCVTALEKTWHTEHFFCAQCGQQFGE-EGFHERDGKPYCRADYFDMFAP 581
CA C PI + ++ ++ WH + F C C + E E +DG RA F
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISEYEIPTNKDGHIEYRAHPF----- 232
Query: 582 KCGGCNKPIMENYISALNTQWHPXCFVCKDCXNPVKGKSFYAMEGKPVCPTCVG---VDD 752
M+ Y A T P C C + P K +G+ +C C+ +D
Sbjct: 233 --------WMQKYCPAHETDRTPRCCSC-ERMEPKDSKYITLDDGRKLCLECLNTSIMDT 283
Query: 753 DE 758
DE
Sbjct: 284 DE 285
>06_01_0228 -
1736373-1736721,1739915-1740120,1740513-1740844,
1740935-1741499
Length = 483
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -1
Query: 638 GVER*DIVFHYGFIATTAFWGEHV 567
GVE D+VF +GFI+++ FW E V
Sbjct: 190 GVETEDVVFVHGFISSSVFWTETV 213
>09_02_0208 - 5802370-5802963
Length = 197
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 43 ALYVLLAAQGEIAGLTCTERNARGRNSTAP 132
AL + +AA+G IAGL R RGRN+ P
Sbjct: 42 ALLLTIAARGSIAGLRNKIRRRRGRNTKKP 71
>04_04_0975 + 29836451-29837032
Length = 193
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 243 EKPIVGQVITALGRTWHPEHFTCAHCNQE 329
++ + + LG TW P +TCA C +E
Sbjct: 51 DEQLAADDVDGLGGTWPPRSYTCAFCRRE 79
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 107 RVAGT-VPHQPASTRVRVSRAYARISSGRHEPPRSTNPPEG 226
RVAG+ +P +P T A R+++GR P +T PP+G
Sbjct: 24 RVAGSSLPRRPTPTT-----AIGRVAAGRRPPAPATGPPQG 59
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 107 RVAGT-VPHQPASTRVRVSRAYARISSGRHEPPRSTNPPEG 226
RVAG+ +P +P T A R+++GR P +T PP+G
Sbjct: 24 RVAGSSLPRRPTPTT-----AIGRVAAGRRPPAPATGPPQG 59
>04_01_0204 +
2467657-2467781,2467955-2468044,2469071-2469169,
2469353-2469371,2469965-2470021,2470585-2471265,
2471639-2471742,2471919-2472057,2472173-2472334,
2472565-2472681
Length = 530
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +3
Query: 423 GPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFD 569
G +D C + WH A CG FG RDGK Y D D
Sbjct: 162 GNPIDDCWRC-DPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSD 209
>11_01_0299 - 2241760-2241990,2242958-2243331,2243427-2243754
Length = 310
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/83 (30%), Positives = 30/83 (36%)
Frame = +3
Query: 195 SRQGVQTPQKGCCNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYC 374
SR GV +P K C C KP ++ + C C RN+F D
Sbjct: 77 SRDGVGSPMKPTCFLCFKPYRSDLM----------YIRCESC------RNWFHGDALELE 120
Query: 375 EPDYHNLFSPRCAYCNGPILDKC 443
E L S RC C L KC
Sbjct: 121 EGRIAQLISYRCCRCRRRPLPKC 143
>05_01_0166 +
1145829-1145971,1146211-1146235,1147330-1147425,
1147544-1147645,1147767-1147889,1147996-1148622,
1148710-1148883,1148965-1149181,1149312-1149394,
1149478-1149573,1149676-1149724,1149850-1150088,
1150547-1150618,1150694-1150804,1150930-1151282,
1151377-1151464,1151691-1151789,1151860-1151991,
1152119-1152222,1153179-1153215,1153334-1153367,
1153451-1153467
Length = 1006
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 148 SPRLSSICSD---LFGQT*A-AKEYKPPRRDAVTPARNRSLDR*SRRWVAPGTLSTSPAL 315
+P++ S C D L Q+ K+ K P R +N +D R+ PG +S+ P +
Sbjct: 528 TPKIHSTCDDNAILNEQSPMLCKDTKTPERSCSEKDKNSDVDGIMRKLCKPGMISSPPKI 587
Query: 316 TATR 327
T R
Sbjct: 588 TKAR 591
>12_01_1096 + 11494100-11494263,11494489-11494633,11494694-11494741
Length = 118
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 769 GIPYSSSSTPT-HVGHTGFPSMA*KDFPLTGXWQSLQTKQ 653
G YSS P + TGF ++ PLT W + QTK+
Sbjct: 65 GFGYSSMMHPNVEITRTGFRAVTTCRLPLTNPWDTQQTKE 104
>09_04_0157 - 15195001-15195178,15195298-15195473
Length = 117
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 121 STAPTRVNPSPRLSSICSDLFGQT*AAK 204
S +PTR P+PR S +CS L T A +
Sbjct: 15 SPSPTRRRPTPRRSHLCSTLLEDTPARR 42
>08_02_1100 +
24303920-24304001,24304080-24304576,24304745-24304842,
24304982-24305813,24306463-24306645,24306726-24307346
Length = 770
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = -2
Query: 337 VPSSWLQ*AQVKCSGCQVRPSAVITCPTIGFSQALQHPFWGV 212
VP W Q V G +V TC GF Q LQ P+WGV
Sbjct: 446 VPQWWFQVMLVAVLGL-----SVFTCE--GFGQQLQLPYWGV 480
>02_05_1011 + 33487670-33487958,33490794-33492100,33492541-33492853,
33493190-33494247
Length = 988
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/73 (24%), Positives = 29/73 (39%)
Frame = +3
Query: 24 DQKHPSGSIRAVSGTGGDSGTHVYREKRAWQEQYRTNPRQPESASLEHMLGSLRADMSRQ 203
D+ + + A SG+G SG+ R RAW Y + + S+R
Sbjct: 855 DELRAAEAAAAASGSGSGSGSRSLRRLRAWARHYDQKDLKSPTFKRRWSDESVRNGSEYA 914
Query: 204 GVQTPQKGCCNAC 242
+TP+ G + C
Sbjct: 915 ASRTPRWGDESPC 927
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 598 INP*WKTISQRSTPSGIXTVSFARTAXIPSKGSPSMPWKGSRYAQHALESMM 753
I P W + S S+ S T+S A A P+ +P W G + + +M
Sbjct: 164 ILPPWMSSSPSSSSSPSVTLSLASAAVAPAPAAPPPTWGGGGGGEVVVAELM 215
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,061,056
Number of Sequences: 37544
Number of extensions: 624812
Number of successful extensions: 1813
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1809
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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