Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_O13
         (608 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   1.9  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   3.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   5.8  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +2

Query: 236  RDQFSEYDSKHKVRQQFVEALQSKFKDSGLKFA 334
            +D FS+Y+  HK +  + E   +K ++   K++
Sbjct: 982  KDYFSQYNKNHKYQNDYYEQFGNKNQEEFQKWS 1014


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 145 DVGHVTHGEVYYLLQFLFTQMVNYAL 68
           ++ H+  GE Y  L FL  + ++YA+
Sbjct: 773 EIRHMVQGETYKFLGFLQLRGIHYAV 798


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
 Frame = +2

Query: 287 VEALQSKFKDSGLKFALGGQISIDVFPIGWDKTYCLNHIASENFVEIHFFGD-KTDPGGN 463
           +E++++ FK+   K  +G + +I   P G D       +  +   +I    + K  PGG 
Sbjct: 742 IESIKTDFKERA-KPKIGSKDNITYKPGGGDVKIVHQKLDIKAESKIGSLDNLKHKPGGG 800

Query: 464 DHEIYNDS---RTVGHRVS-SPS 520
           D +I++D    + + H ++ SPS
Sbjct: 801 DKKIFDDKEYLKNIEHPITPSPS 823


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,043
Number of Sequences: 2352
Number of extensions: 11795
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)