Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_O13
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82268-3|CAB05198.2| 225|Caenorhabditis elegans Hypothetical pr... 237 3e-63
Z68222-7|CAA92504.2| 568|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF078787-9|AAK82921.1| 183|Caenorhabditis elegans Hypothetical ... 29 2.6
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 3.4
Z75546-8|CAC42331.2| 640|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 27 7.9
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 27 7.9
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 27 7.9
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 27 7.9
>Z82268-3|CAB05198.2| 225|Caenorhabditis elegans Hypothetical
protein F52B11.2 protein.
Length = 225
Score = 237 bits (581), Expect = 3e-63
Identities = 107/182 (58%), Positives = 135/182 (74%)
Frame = +2
Query: 5 FNYVFSENGLVHHKNGKKLSSESIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFR 184
F+Y FSENGL K + +SI +G+ KLQE+INFA+ YMS+I+LPVKRGNF+EFR
Sbjct: 41 FDYTFSENGLYGFKGTEPYPVQSIQKAIGDAKLQELINFALRYMSDIQLPVKRGNFVEFR 100
Query: 185 SSMLNICPVGRSCNQIERDQFSEYDSKHKVRQQFVEALQSKFKDSGLKFALGGQISIDVF 364
+ M+N+ P+GRSC+Q ER QF E+D KH +RQ+F E L+ KF GL+FA+GGQIS+DVF
Sbjct: 101 NGMINLSPIGRSCSQEERMQFVEFDKKHGIRQKFTEQLREKFGQYGLQFAIGGQISVDVF 160
Query: 365 PIGWDKTYCLNHIASENFVEIHFFGDKTDPGGNDHEIYNDSRTVGHRVSSPSDTEMQVKK 544
P GWDKT+CL ++ + F IHFFGDKT PGGNDHEI+ D RTVGH V P DT V+
Sbjct: 161 PTGWDKTFCLQYLVPD-FDTIHFFGDKTAPGGNDHEIFADERTVGHTVEGPEDTRKHVEN 219
Query: 545 CL 550
L
Sbjct: 220 VL 221
>Z68222-7|CAA92504.2| 568|Caenorhabditis elegans Hypothetical
protein ZK1251.8 protein.
Length = 568
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 50 GKKLSSESIVNHLGEQ---KLQEVINFAMGYMSNIKLPVKRGNFIEFR 184
GKK++ +S+V HLG+Q +E+ NF M + + V++G R
Sbjct: 417 GKKMTMKSLVKHLGDQFNIPEEELANFDMSAFVDNAIKVEKGEIATLR 464
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +2
Query: 215 RSCNQIERDQFSEYDSKHKVRQQFVEALQSKFKDSGLKFALGGQISIDVFPIGWDKTYCL 394
+S NQ+++ +++ K+R + + ++ + LK + I D +KT
Sbjct: 143 KSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIP-DSIGKDIEKTCSK 201
Query: 395 NHIASENFV-EIHFFGDKTDPGGNDHEIYNDSRTV---GHRVSSPSDTEMQVKK 544
+ E ++ ++ G H+++ DS TV G +V P D E V++
Sbjct: 202 LYPLQEVYIRKVKIIKRPKVDLGRLHDLHGDSITVGADGEKVDRPDDYEPPVQQ 255
>AF078787-9|AAK82921.1| 183|Caenorhabditis elegans Hypothetical
protein T17A3.9 protein.
Length = 183
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/85 (21%), Positives = 33/85 (38%)
Frame = +2
Query: 185 SSMLNICPVGRSCNQIERDQFSEYDSKHKVRQQFVEALQSKFKDSGLKFALGGQISIDVF 364
S + N+CP+ S N+ ++ + + KF+ G+K G I +
Sbjct: 38 SQVANVCPIPASFNKTVDTNWTVDQLQEGQLAMLLAQDVGKFRPLGIKNIKKGNIETQIL 97
Query: 365 PIGWDKTYCLNHIASENFVEIHFFG 439
P D L ++ E+ H+ G
Sbjct: 98 PRQIDPKEILENLNKEDNASDHYVG 122
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 20 SENGLVHHKNGKKLSSESIVNHLGEQKLQEVINFA 124
+E GLV +N KL E++ + E +LQE++ A
Sbjct: 104 AELGLVTVRNNVKLMQEALKPDISESRLQEILQMA 138
>Z75546-8|CAC42331.2| 640|Caenorhabditis elegans Hypothetical
protein R05D11.9 protein.
Length = 640
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 505 SVSHSPRVIVNFMIIPTRVCFVSKEVNFNKIL 410
+VS PR++ NF T+ C ++ N NK+L
Sbjct: 185 TVSFQPRLVQNFCNFVTKSCTTAQFTNANKLL 216
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +2
Query: 107 EVINFAMGYMSNIKLPVKRGNFIEFRSSMLNIC--PV---GRSCNQIERDQFSEYDSK 265
E++NF G +K + GN ++ +C P G Q+E ++F YD K
Sbjct: 463 ELVNFVFGVEDRVKKAEENGNSFFVANTNETVCDRPYTLRGEQILQVEVEKFQPYDEK 520
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +2
Query: 107 EVINFAMGYMSNIKLPVKRGNFIEFRSSMLNIC--PV---GRSCNQIERDQFSEYDSK 265
E++NF G +K + GN ++ +C P G Q+E ++F YD K
Sbjct: 463 ELVNFVFGVEDRVKKAEENGNSFFVANTNETVCDRPYTLRGEQILQVEVEKFQPYDEK 520
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 237 EISFLSMIQNTKLDNNLLKHF 299
+I LSM+Q+ KL NN L HF
Sbjct: 168 QIRRLSMLQSLKLSNNPLNHF 188
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 237 EISFLSMIQNTKLDNNLLKHF 299
+I LSM+Q+ KL NN L HF
Sbjct: 168 QIRRLSMLQSLKLSNNPLNHF 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,709,694
Number of Sequences: 27780
Number of extensions: 283260
Number of successful extensions: 749
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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