Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_O08
(576 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein. 36 0.14
AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein. 36 0.14
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 34 0.41
AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein. 34 0.41
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 34 0.41
AC006950-2|AAD15624.1| 735|Homo sapiens IgG Fc binding protein ... 34 0.41
X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ... 33 0.55
X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA frag... 33 0.55
M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro... 33 0.55
AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein. 33 0.72
AK127639-1|BAC87067.1| 394|Homo sapiens protein ( Homo sapiens ... 32 1.3
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 30 5.1
AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein. 30 5.1
AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein. 30 5.1
Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding p... 30 6.7
BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1... 30 6.7
AF051345-1|AAC39880.2| 1624|Homo sapiens latent transforming gro... 30 6.7
AF051344-1|AAC39879.2| 1557|Homo sapiens latent transforming gro... 30 6.7
AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein. 30 6.7
>AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein.
Length = 1283
Score = 35.5 bits (78), Expect = 0.14
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIAT--CHCDSGYLFNSEGKCVPVAEC 283
PTC +C +F+ C C +G N G CVP EC
Sbjct: 670 PTCRGLSEADVTCSVSFVPVDGCTCPAGTFLNDAGACVPAQEC 712
>AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein.
Length = 1594
Score = 35.5 bits (78), Expect = 0.14
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIAT--CHCDSGYLFNSEGKCVPVAEC 283
PTC +C +F+ C C +G N G CVP EC
Sbjct: 711 PTCRGLSEADVTCSVSFVPVDGCTCPAGTFLNDAGACVPAQEC 753
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 33.9 bits (74), Expect = 0.41
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 221 CHCDSGYLFNSEGKCVPVAEC 283
C CDSG+L+N + CVP+ +C
Sbjct: 1566 CQCDSGFLYNGQA-CVPIQQC 1585
Score = 33.9 bits (74), Expect = 0.41
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 221 CHCDSGYLFNSEGKCVPVAEC 283
C CDSG+L+N + CVP+ +C
Sbjct: 2767 CQCDSGFLYNGQA-CVPIQQC 2786
Score = 33.9 bits (74), Expect = 0.41
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 221 CHCDSGYLFNSEGKCVPVAEC 283
C CDSG+L+N + CVP+ +C
Sbjct: 3968 CQCDSGFLYNGQA-CVPIQQC 3987
Score = 33.9 bits (74), Expect = 0.41
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 191 TSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
T C T C CD +L S+G C+PV +C
Sbjct: 5145 TGCTTRCFEGCECDDRFLL-SQGVCIPVQDC 5174
>AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein.
Length = 1321
Score = 33.9 bits (74), Expect = 0.41
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIAT--CHCDSGYLFNSEGKCVPVAEC 283
PTC +C +F+ C C +G N G CVP +C
Sbjct: 709 PTCRGLSEADVTCSVSFVPVDGCTCPAGTFLNDAGACVPAQKC 751
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 33.9 bits (74), Expect = 0.41
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 221 CHCDSGYLFNSEGKCVPVAEC 283
C CDSG+L+N + CVP+ +C
Sbjct: 1566 CQCDSGFLYNGQA-CVPIQQC 1585
Score = 33.9 bits (74), Expect = 0.41
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 221 CHCDSGYLFNSEGKCVPVAEC 283
C CDSG+L+N + CVP+ +C
Sbjct: 2767 CQCDSGFLYNGQA-CVPIQQC 2786
>AC006950-2|AAD15624.1| 735|Homo sapiens IgG Fc binding protein [AA
4671-5405] protein.
Length = 735
Score = 33.9 bits (74), Expect = 0.41
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 191 TSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
T C T C CD +L S+G C+PV +C
Sbjct: 475 TGCTTRCFEGCECDDRFLL-SQGVCIPVQDC 504
>X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for
pre-pro-von Willebrand factor. ).
Length = 2813
Score = 33.5 bits (73), Expect = 0.55
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 149 TPGVPTCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
TP TC C A + C C G + G CVP A+C
Sbjct: 663 TPCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDERGDCVPKAQC 707
>X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA
fragment (5'terminus) for von Willebrand factor (vWF).
).
Length = 1400
Score = 33.5 bits (73), Expect = 0.55
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 149 TPGVPTCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
TP TC C A + C C G + G CVP A+C
Sbjct: 663 TPCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDERGDCVPKAQC 707
>M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor
protein.
Length = 2813
Score = 33.5 bits (73), Expect = 0.55
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 149 TPGVPTCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
TP TC C A + C C G + G CVP A+C
Sbjct: 663 TPCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDERGDCVPKAQC 707
>AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein.
Length = 2155
Score = 33.1 bits (72), Expect = 0.72
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVP 271
P CA LK + C + CHCD+GY+ N + +P
Sbjct: 1387 PRCAAIRLK-SDCSHYCVEGCHCDAGYVLNGKSCILP 1422
>AK127639-1|BAC87067.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ45737 fis, clone JCMLC2002751, weakly similar
to Von Willebrand factor precursor. ).
Length = 394
Score = 32.3 bits (70), Expect = 1.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 161 PTCADPELKHTSC--VTAFIATCHCDSGYLFNSEGKCVPVAEC 283
P C K C + + +A C+C G L++ EG+CVP + C
Sbjct: 173 PACGQHCGKPEDCGELGSCVAGCNCPLGLLWDPEGQCVPPSLC 215
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 30.3 bits (65), Expect = 5.1
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIAT--CHCDSGYLFNSEGKCVPVAEC 283
PTC +C FI C C G + GKCV + C
Sbjct: 719 PTCRSLSEGDITCSVGFIPVDGCICPKGTFLDDTGKCVQASNC 761
>AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.
Length = 1373
Score = 30.3 bits (65), Expect = 5.1
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIAT--CHCDSGYLFNSEGKCVPVAEC 283
PTC +C FI C C G + GKCV + C
Sbjct: 721 PTCRSLSEGDITCSVGFIPVDGCICPKGTFLDDTGKCVQASNC 763
>AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein.
Length = 1104
Score = 30.3 bits (65), Expect = 5.1
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIAT--CHCDSGYLFNSEGKCVPVAEC 283
PTC +C FI C C G + GKCV + C
Sbjct: 719 PTCRSLSEGDITCSVGFIPVDGCICPKGTFLDDTGKCVQASNC 761
>Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding
protein-4 protein.
Length = 1587
Score = 29.9 bits (64), Expect = 6.7
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 218 TCHCDSGYLFNSEG-KCVPVAEC 283
TC CDSG+ + +G +C+ V EC
Sbjct: 532 TCACDSGFRLSPQGTRCIDVDEC 554
>BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1
homolog (S. cerevisiae) protein.
Length = 1221
Score = 29.9 bits (64), Expect = 6.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 164 TCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
T + K +SC T C C + YL +S G+C+ EC
Sbjct: 959 TAEEKRPKDSSCRTC----CRCGTEYLVSSSGRCIRDEEC 994
>AF051345-1|AAC39880.2| 1624|Homo sapiens latent transforming growth
factor-beta binding protein 4L protein.
Length = 1624
Score = 29.9 bits (64), Expect = 6.7
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 218 TCHCDSGYLFNSEG-KCVPVAEC 283
TC CDSG+ + +G +C+ V EC
Sbjct: 569 TCACDSGFRLSPQGTRCIDVDEC 591
>AF051344-1|AAC39879.2| 1557|Homo sapiens latent transforming growth
factor-beta binding protein 4S protein.
Length = 1557
Score = 29.9 bits (64), Expect = 6.7
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 218 TCHCDSGYLFNSEG-KCVPVAEC 283
TC CDSG+ + +G +C+ V EC
Sbjct: 502 TCACDSGFRLSPQGTRCIDVDEC 524
>AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein.
Length = 1239
Score = 29.9 bits (64), Expect = 6.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 164 TCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
T + K +SC T C C + YL +S G+C+ EC
Sbjct: 977 TAEEKRPKDSSCRTC----CRCGTEYLVSSSGRCIRDEEC 1012
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,688,644
Number of Sequences: 237096
Number of extensions: 1799937
Number of successful extensions: 3742
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3736
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -