Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_O08
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of s... 36 0.016
U50311-11|AAN84861.1| 86|Caenorhabditis elegans Inhibitor of s... 35 0.036
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 34 0.083
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 34 0.083
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 34 0.083
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 34 0.083
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 33 0.15
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 33 0.15
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 33 0.15
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 31 0.59
U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 1.8
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 1.8
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 1.8
Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical pr... 29 2.4
U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc... 29 2.4
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z79597-1|CAB01861.1| 271|Caenorhabditis elegans Hypothetical pr... 28 4.1
U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical p... 28 5.5
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF025453-6|AAM98051.1| 288|Caenorhabditis elegans Hypothetical ... 27 9.5
>U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform a
protein.
Length = 135
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 164 TCADPELKHT--SCVTAFIA-TCHCDSGYLFNSEGKCVPVAEC 283
TC +P+ +T +C I TC C G++ NS GKCV V+EC
Sbjct: 32 TC-EPQCGYTPKACTEQCIMNTCDCKDGFVRNSLGKCVEVSEC 73
>U50311-11|AAN84861.1| 86|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform b
protein.
Length = 86
Score = 35.1 bits (77), Expect = 0.036
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 218 TCHCDSGYLFNSEGKCVPVAEC 283
TC C G++ NS GKCV V+EC
Sbjct: 3 TCDCKDGFVRNSLGKCVEVSEC 24
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 33.9 bits (74), Expect = 0.083
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 167 CADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
C +C+ A C C G++ N++G CV AEC
Sbjct: 117 CPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 33.9 bits (74), Expect = 0.083
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 167 CADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
C +C+ A C C G++ N++G CV AEC
Sbjct: 117 CPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 194 SCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
+C+ C C G+L N +G+CV EC
Sbjct: 190 NCMEKCDIGCSCKKGFLRNRQGQCVNPTEC 219
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 221 CHCDSGYLFNSEGKCVPVAEC 283
C C SGYL +S+G+C +C
Sbjct: 528 CACASGYLRSSDGECYKPKDC 548
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 33.9 bits (74), Expect = 0.083
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 167 CADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
C +C+ A C C G++ N++G CV AEC
Sbjct: 117 CPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155
Score = 30.7 bits (66), Expect = 0.78
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 197 CVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
C+ C C G + N +G+CV +AEC
Sbjct: 256 CMMRCEKACSCKKGLVRNRQGQCVKLAEC 284
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 194 SCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
+C+ C C G+L N +G+CV EC
Sbjct: 190 NCMEKCDIGCSCKKGFLRNRQGQCVNPTEC 219
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 221 CHCDSGYLFNSEGKCVPVAEC 283
C C SGYL +S+G+C +C
Sbjct: 593 CACASGYLRSSDGECYKPKDC 613
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 33.9 bits (74), Expect = 0.083
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 167 CADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
C +C+ A C C G++ N++G CV AEC
Sbjct: 117 CPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 194 SCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
+C+ C C G+L N +G+CV EC
Sbjct: 190 NCMEKCDIGCSCKKGFLRNRQGQCVNPTEC 219
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 167 CADPELKHTSCVT--AFIATCHCDSGYLFNSEGKCVPVAEC 283
C +L+ + C + F TC C SGY N G+C+ + EC
Sbjct: 163 CDHCDLRTSFCKSNSKFNYTCECRSGYEKNQYGECIDIDEC 203
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 167 CADPELKHTSCVT--AFIATCHCDSGYLFNSEGKCVPVAEC 283
C +L+ + C + F TC C SGY N G+C+ + EC
Sbjct: 163 CDHCDLRTSFCKSNSKFNYTCECRSGYEKNQYGECIDIDEC 203
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 167 CADPELKHTSCVT--AFIATCHCDSGYLFNSEGKCVPVAEC 283
C +L+ + C + F TC C SGY N G+C+ + EC
Sbjct: 163 CDHCDLRTSFCKSNSKFNYTCECRSGYEKNQYGECIDIDEC 203
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 31.1 bits (67), Expect = 0.59
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 182 LKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
LK T C C C GYL +S+G+C +C
Sbjct: 762 LKKTECTNRCGQGCACAYGYLRSSDGECYKPKDC 795
>U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical
protein C25E10.8 protein.
Length = 137
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 221 CHCDSGYLFNSEGKCVPVAEC 283
C C G++ NS GKCV ++ C
Sbjct: 55 CDCKKGFVRNSLGKCVDISTC 75
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
P DP + C C +GY +G+CV + EC
Sbjct: 241 PMSCDPAKREVCIFVENTYKCRCANGYSRLPDGRCVVINEC 281
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
P DP + C C +GY +G+CV + EC
Sbjct: 825 PMSCDPAKREVCIFVENTYKCRCANGYSRLPDGRCVVINEC 865
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
P DP + C C +GY +G+CV + EC
Sbjct: 241 PMSCDPAKREVCIFVENTYKCRCANGYSRLPDGRCVVINEC 281
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
P DP + C C +GY +G+CV + EC
Sbjct: 825 PMSCDPAKREVCIFVENTYKCRCANGYSRLPDGRCVVINEC 865
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
P DP + C C +GY +G+CV + EC
Sbjct: 825 PMSCDPAKREVCIFVENTYKCRCANGYSRLPDGRCVVINEC 865
>Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical
protein F52F12.6 protein.
Length = 539
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 277 GNGHAFSLRVEEVSRITVAGCDESRHATGVF 185
G G+++S+R E GCD S H TG++
Sbjct: 250 GTGYSWSIRREGKLACPTPGCDGSGHQTGLY 280
>U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc
finger proteinC.e-MyT1 protein.
Length = 539
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 277 GNGHAFSLRVEEVSRITVAGCDESRHATGVF 185
G G+++S+R E GCD S H TG++
Sbjct: 250 GTGYSWSIRREGKLACPTPGCDGSGHQTGLY 280
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
protein C09F9.2 protein.
Length = 1642
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 191 TSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
+ C A C C GY N +G+CV +C
Sbjct: 518 SECTDCGSAACACLQGYARNPQGQCVYWGDC 548
>Z79597-1|CAB01861.1| 271|Caenorhabditis elegans Hypothetical
protein C33A11.2 protein.
Length = 271
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 88 LAASKSLFEKSCPENAHTTLNPWRADLCRPGIETHQL 198
+AASK +F K+ P+ T PW + +PG E HQ+
Sbjct: 182 IAASK-IFHKTYPDLP--TPRPWSRRIYQPGYELHQI 215
>U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical
protein K05F1.10 protein.
Length = 140
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 161 PTCADPELKHTSCVTAFIATCHCDSGYLFNSEGKCVPVAEC 283
P C + L H C + C C+ GY+ + +G C+ + C
Sbjct: 79 PHCLN-HLHHAKC---YFPRCVCNDGYVRSEKGICIRPSHC 115
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 161 PTCADPELKHTSC-VTAFIATCHCDSGYLFNSEGKCVPVAEC 283
PTC P + C V +C C G+++++ +C+P C
Sbjct: 44 PTCESP---NPQCRVDCTRPSCTCLPGHVYSNSRQCIPANSC 82
>AF025453-6|AAM98051.1| 288|Caenorhabditis elegans Hypothetical
protein C08F1.10 protein.
Length = 288
Score = 27.1 bits (57), Expect = 9.5
Identities = 7/29 (24%), Positives = 18/29 (62%)
Frame = -2
Query: 539 NSRYVSLNVSIFNFNFWIYVLLLRCMDEL 453
+S+Y + ++ + F W+ + ++ C DE+
Sbjct: 15 DSKYTTPSLQFYYFYIWLAIFVISCFDEI 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,189,083
Number of Sequences: 27780
Number of extensions: 283856
Number of successful extensions: 869
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -