Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_O05
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     27   0.57 
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        24   4.0  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        24   4.0  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        24   4.0  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        24   4.0  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   4.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   9.2  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +3

Query: 447 VSEPTKIVPEHQTEAAKKSETXSSTE--AKKEDATTPKSELAKST-EAPTHIEPTVQARA 617
           V+ PT       TEAA  ++  ++TE     E+ATT  +E A +T EA T  E T  A A
Sbjct: 128 VASPTTAEASTTTEAATTTQEATTTEEATTTEEATT--TEKATTTEEATTTEEATTTAEA 185


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 316 VTFXASGFTFLSSVLVSTAEVVFCF 242
           +   A+GFT  +S+++    ++FC+
Sbjct: 153 INLIAAGFTIAASIIIGGLLMLFCY 177


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 316 VTFXASGFTFLSSVLVSTAEVVFCF 242
           +   A+GFT  +S+++    ++FC+
Sbjct: 153 INLIAAGFTIAASIIIGGLLMLFCY 177


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 316 VTFXASGFTFLSSVLVSTAEVVFCF 242
           +   A+GFT  +S+++    ++FC+
Sbjct: 153 INLIAAGFTIAASIIIGGLLMLFCY 177


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 316 VTFXASGFTFLSSVLVSTAEVVFCF 242
           +   A+GFT  +S+++    ++FC+
Sbjct: 153 INLIAAGFTIAASIIIGGLLMLFCY 177


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 316 VTFXASGFTFLSSVLVSTAEVVFCF 242
           +   A+GFT  +S+++    ++FC+
Sbjct: 729 INLIAAGFTIAASIIIGGLLMLFCY 753


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 474 EHQTEAAKKSETXSSTEAKKEDATTPKSELA 566
           +H    AK+SET    +  ++  + P+S+LA
Sbjct: 486 KHHERCAKQSETTRIEKQLEQFESAPRSKLA 516


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,137
Number of Sequences: 2352
Number of extensions: 9244
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)