Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_O03
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   1.7  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   6.7  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   6.7  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
 Frame = +2

Query: 284 FLSNTYRRTFVEMHYPWCDLIFKDM-FFGPALRQGKLLKPCPHPPDDYKLVNMTVPPAAI 460
           FL  T RR   +   P    IF  + +  P +   KL  P    P D       +P   +
Sbjct: 685 FLGRTARRALGDFGVPISIAIFVLVDYLTPQVYTEKLSVPEGLSPSDQTRRGWLIPMGGV 744

Query: 461 PSSFPF 478
           PS  PF
Sbjct: 745 PSWLPF 750


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 317 EMHYPWCDLIFKDMFFGPALRQGKL 391
           E +YP C   + D+FF   LR+  L
Sbjct: 229 EKYYPCCAEPYPDIFFNITLRRKTL 253


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 591 IFVPAFTLISLISMSMWPQATQCFGFAVVKLAS 493
           +F   FT ISL  +  WP     FG A+ +L +
Sbjct: 187 LFCVPFTFISLFVLQYWP-----FGLAMCRLVN 214


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,990
Number of Sequences: 2352
Number of extensions: 13926
Number of successful extensions: 75
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)