Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_N21
(397 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 89 1e-18
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 89 1e-18
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 89 1e-18
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 89 1e-18
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 89 1e-18
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 89 1e-18
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 89 1e-18
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 53 7e-08
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426... 29 1.8
02_01_0043 + 300122-300907,301447-301722,302347-302481 28 3.1
03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058 27 4.1
02_01_0440 - 3188102-3188372,3189134-3189906 27 4.1
05_06_0285 + 26922967-26923051,26923258-26923362,26924044-269240... 27 7.2
03_05_0671 + 26608953-26609671,26609775-26610495 27 7.2
05_01_0527 - 4541922-4541987,4543996-4544130,4544674-4544941,454... 26 9.6
03_04_0037 + 16694760-16695227,16695563-16695642,16695735-166958... 26 9.6
03_01_0004 + 41829-42203,42376-42474,42699-42743,43604-43741,438... 26 9.6
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +3
Query: 111 QKVQGKGTLP-RXXRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 287
Q +GK +L + RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +K
Sbjct: 55 QYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIK 114
Query: 288 RCKHFELGGDKKRKG 332
RCKHFE+GGDKK KG
Sbjct: 115 RCKHFEIGGDKKGKG 129
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +3
Query: 111 QKVQGKGTLP-RXXRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 287
Q +GK +L + RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +K
Sbjct: 27 QYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIK 86
Query: 288 RCKHFELGGDKKRKG 332
RCKHFE+GGDKK KG
Sbjct: 87 RCKHFEIGGDKKGKG 101
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +3
Query: 111 QKVQGKGTLP-RXXRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 287
Q +GK +L + RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +K
Sbjct: 55 QYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIK 114
Query: 288 RCKHFELGGDKKRKG 332
RCKHFE+GGDKK KG
Sbjct: 115 RCKHFEIGGDKKGKG 129
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +3
Query: 111 QKVQGKGTLP-RXXRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 287
Q +GK +L + RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +K
Sbjct: 27 QYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIK 86
Query: 288 RCKHFELGGDKKRKG 332
RCKHFE+GGDKK KG
Sbjct: 87 RCKHFEIGGDKKGKG 101
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +3
Query: 111 QKVQGKGTLP-RXXRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 287
Q +GK +L + RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +K
Sbjct: 54 QYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIK 113
Query: 288 RCKHFELGGDKKRKG 332
RCKHFE+GGDKK KG
Sbjct: 114 RCKHFEIGGDKKGKG 128
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +3
Query: 111 QKVQGKGTLP-RXXRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 287
Q +GK +L + RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +K
Sbjct: 55 QYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIK 114
Query: 288 RCKHFELGGDKKRKG 332
RCKHFE+GGDKK KG
Sbjct: 115 RCKHFEIGGDKKGKG 129
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +3
Query: 111 QKVQGKGTLP-RXXRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 287
Q +GK +L + RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +K
Sbjct: 27 QYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIK 86
Query: 288 RCKHFELGGDKKRKG 332
RCKHFE+GGDKK KG
Sbjct: 87 RCKHFEIGGDKKGKG 101
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 53.2 bits (122), Expect = 7e-08
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 231 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 332
IVL+L+C CK SQ +KRCKHF++GGDKK KG
Sbjct: 25 IVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>03_04_0161 +
17838466-17838551,17842379-17842445,17842537-17842662,
17842756-17842886,17843121-17843220,17843334-17843466,
17843500-17843544,17843545-17843608,17843692-17844469,
17844897-17845229,17845427-17845634,17845733-17845809,
17846168-17846240,17846343-17846413,17846597-17846716,
17846815-17846879,17846974-17847124
Length = 875
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 150 RRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 296
+ + + QG GG S +F ++LE ADC + +V RCK
Sbjct: 207 KELEGRLQGIGGFSNCLFTFLFAGVSMDEVKLEQADCDMDERVYCDRCK 255
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 334 CPFLFLSPPSSKCLHLFNATCDLTLQSAH 248
CP F SPPSS C F ++ DL H
Sbjct: 45 CPLGFTSPPSSSCPLGFTSSYDLDAAFHH 73
>03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058
Length = 339
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -2
Query: 375 QWSYLLEAFKIGSSVPFSSCHHRAQSACISSMQPVISPCNLH 250
+W + E F+ G+ S H R S+C P P + H
Sbjct: 138 RWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQPPPPFPMHQH 179
>02_01_0440 - 3188102-3188372,3189134-3189906
Length = 347
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -3
Query: 143 PGQRAFTLD-FLYCDTLCTLWHLHFLQYVLRCFGTFTIFEFVRHASAG 3
PG A ++ FL C W + L +L C T+F R AS G
Sbjct: 31 PGPSAASMPLFLGSRRRCCAWLVALLLALLTCVSLLTVFSTARAASEG 78
>05_06_0285 +
26922967-26923051,26923258-26923362,26924044-26924072,
26925078-26925224,26926402-26926632
Length = 198
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -2
Query: 393 FFFXFRQWSYLLEAFKIGSSVPFSSCHHRAQSACISSMQPVISPCNLH--TQDGAQFS 226
FF F Q LL+A +G + + S HR + C SSM +S C+ + ++ A FS
Sbjct: 15 FFLLFAQ---LLQARMLGEA--YYSYPHRIRIKCSSSMDCNLSSCSCYVGSKSNASFS 67
>03_05_0671 + 26608953-26609671,26609775-26610495
Length = 479
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 276 VALKRCKHFELGGDKKRKGQMIQF*MLLINK 368
+A + CKHFE + R G I+ ++ INK
Sbjct: 357 IAAQDCKHFEAASYEDRNGNSIRNVIVPINK 387
>05_01_0527 -
4541922-4541987,4543996-4544130,4544674-4544941,
4545429-4545751,4546096-4546212,4546309-4546422,
4546613-4546786,4546848-4546999,4547133-4547298,
4547387-4547525,4547622-4547814,4548084-4548166,
4548250-4548365,4548878-4548947,4549151-4549272
Length = 745
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 142 LGSVPLPWTFCTVIPCVL-CGIYIF 71
L SVP P+ F ++P V+ G+Y F
Sbjct: 349 LFSVPPPYIFLAIVPAVMVAGLYFF 373
>03_04_0037 +
16694760-16695227,16695563-16695642,16695735-16695828,
16695973-16696071,16696650-16696742,16696822-16696941,
16697422-16697525,16697734-16697806,16698023-16698085
Length = 397
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 181 VVSPNPSSKRRQKPLRKLCSVLSVQIAR 264
VV+P P +R+Q+PL C S+ R
Sbjct: 58 VVAPAPRHRRKQRPLHYACRPTSLPCRR 85
>03_01_0004 +
41829-42203,42376-42474,42699-42743,43604-43741,
43852-44157,44779-45689,45826-46093
Length = 713
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 249 CADCKVRSQVALKRCKHFELGGDKKRKGQ 335
C CK + RC + GDKKR GQ
Sbjct: 93 CESCKAMCKANDCRCDSWVFCGDKKRCGQ 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,206,394
Number of Sequences: 37544
Number of extensions: 177514
Number of successful extensions: 456
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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