Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_N16
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0491 + 18043087-18043548                                         31   0.89 
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440...    29   3.6  
08_01_0701 + 6200351-6200470,6200879-6201104,6201502-6201747,620...    29   3.6  
06_01_0524 - 3794723-3795238,3796209-3796378,3797129-3797615           29   3.6  
08_01_0100 - 714244-715461                                             28   8.3  
07_03_1336 - 25868238-25868284,25868731-25869079                       28   8.3  

>09_04_0491 + 18043087-18043548
          Length = 153

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 190 CGAHASGWAGPPANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSYD 363
           C ++ SGW    A+   S D R I+      +  +   +  ++  +N  + NDDG YD
Sbjct: 14  CNSNESGWTMYLASPTHSDDVRAIVSEGSNVEDGSGFSNERRRGKENKGHANDDGDYD 71


>09_04_0684 -
           19442335-19442990,19443774-19443839,19443935-19444032,
           19444787-19445157
          Length = 396

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
 Frame = +1

Query: 664 PAHQDWNAPAHQDWN---APAHQSWNGAPSWQSGAPAHQPANIRLANDGSG 807
           P +Q  N P +Q  N   AP +    G PS+Q G   +         DG G
Sbjct: 342 PGYQGGNPPPYQGGNPGYAPGYHGQGGNPSYQQGGDNYNAGVPAYERDGQG 392


>08_01_0701 +
           6200351-6200470,6200879-6201104,6201502-6201747,
           6201818-6201868,6202231-6202491,6202587-6202639,
           6202705-6202819,6202985-6203239,6203773-6204827
          Length = 793

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 96  TIFIFLSLFHFCASFHYENEIHDRSSL 176
           T FI + ++HFC    YE E+H + S+
Sbjct: 507 TCFIIMYVWHFCTVKRYEFEMHSKVSM 533


>06_01_0524 - 3794723-3795238,3796209-3796378,3797129-3797615
          Length = 390

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +1

Query: 211 WAGPPANIALSQDGRNILDTPEVAQARAAHISALQQ 318
           W+  P+++  S+DGR  +   E++ A +AHI  + +
Sbjct: 289 WSEIPSDVESSRDGRRYISGEELSDADSAHIVVMDK 324


>08_01_0100 - 714244-715461
          Length = 405

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
 Frame = +2

Query: 209 VGPAHPPTLLCLKMDAIFWTHPKSHRLVPHTFPLFSRLRKITPTQMT-TDHTTLDG 373
           VGPAH        +D + WT P+    V   F LF   R + P  +   DH    G
Sbjct: 313 VGPAHRLPFFDGTLDIVHWTSPEHVAGVMLEFALFDIYRVLRPGGLLWLDHFVFPG 368


>07_03_1336 - 25868238-25868284,25868731-25869079
          Length = 131

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 160 MIVVACLALACGAHASGWAGPPANIALSQDGRNI 261
           ++VVA LALACGA +   A  PA    S  G +I
Sbjct: 8   VVVVAVLALACGAASQSPAPAPAAGPASDCGSSI 41


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.127    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,657,690
Number of Sequences: 37544
Number of extensions: 413771
Number of successful extensions: 1532
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)