Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_N16
         (856 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical ...    33   0.26 
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z72504-6|CAA96604.2|  906|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    29   5.6  
AF016442-9|AAB65921.1|  714|Caenorhabditis elegans Hypothetical ...    29   5.6  
Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z81527-2|CAB04270.1|  361|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical
           protein Y53H1A.1 protein.
          Length = 613

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +1

Query: 664 PAHQDWNAPAHQDWNAPAHQSWNG--APSWQSGAPAH 768
           PAHQDW      DW+A   + W G   PS  SG P +
Sbjct: 59  PAHQDWG-----DWSANRDEQWRGPPGPSGPSGPPVY 90


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
 Frame = +3

Query: 612 CSCPTTME--RPSSPGLECPRPPGLERSRSPGLE---CSRSPIMERSSLLAIRCPRSPAR 776
           C CP   +   P S G   P+PP    + +PG      +R+P   R+     R P +  R
Sbjct: 274 CPCPQRQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATTR 333

Query: 777 *HQTSQRWFRHP 812
               SQ   R P
Sbjct: 334 PAPASQPPVREP 345


>Z72504-6|CAA96604.2|  906|Caenorhabditis elegans Hypothetical
           protein C29E6.4 protein.
          Length = 906

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 142 ITKMKSMIVVACLALA-CGAHASGWAGPPANIALSQDGRNIL 264
           +  +KS +    L +  C AH  G  GPPA++ L  DG  +L
Sbjct: 728 LATVKSNVSAELLRIVDCTAHRVGGTGPPASVNLIADGCALL 769


>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 664 PAHQDWNAPAHQDWNAPAHQSWNGAPSWQSGAPAH 768
           P    + AP  Q ++AP+ QS+ G P   S AP +
Sbjct: 343 PPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGN 377


>AF016442-9|AAB65921.1|  714|Caenorhabditis elegans Hypothetical
           protein K12B6.8 protein.
          Length = 714

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = +3

Query: 411 ERCSRSCLERCPRPLMER---CPCC 476
           ERC++S  E+C  PL+++   CP C
Sbjct: 673 ERCTKSIHEKCAAPLLQQSVMCPTC 697


>Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical
           protein ZK849.4 protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +1

Query: 220 PPANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPN---DDGSYDPRWDNE 381
           PPA    +   R+ L     AQA  A  +  Q  S   PNPN   D+  + P  DNE
Sbjct: 505 PPAEALRADQPRHSLIHEVGAQADPAEANGAQALSPVLPNPNERADEHGHSPVIDNE 561


>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical
           protein ZK1067.2 protein.
          Length = 2219

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 639 PSSPGLECPRPPGLERSRSPGL 704
           P  PGL  P PPG+     PG+
Sbjct: 44  PQPPGLSIPAPPGISLPTPPGI 65


>Z81527-2|CAB04270.1|  361|Caenorhabditis elegans Hypothetical
           protein F35E12.2 protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 230 TLLCLKMDAIFWTHPKSHRLVPHTFPLFSRLRKITPTQMTTDHTTLDGTMKS 385
           T +C      +WT  K H+   +    +  LR ++PT  T+  T L+ TM S
Sbjct: 273 TWICSDCQHFYWTVLKFHKSKTNISKTYIELRPLSPTYNTS--TLLNYTMSS 322


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.127    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,201,785
Number of Sequences: 27780
Number of extensions: 313098
Number of successful extensions: 1204
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)