Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_N08
         (771 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...    52   3e-07
Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z96047-4|CAB09414.1|  796|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    28   8.5  
U49944-3|AAM51525.1|  341|Caenorhabditis elegans Mesodermal line...    28   8.5  
U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
 Frame = +3

Query: 51  CVECIDSGKMTKDLVICIHGL-ANTKEGMFLHTEDFLEAI 167
           C++ ++ GKMTKDL ICIHG    T++G +L TEDFL AI
Sbjct: 385 CIDTVEEGKMTKDLSICIHGTKKGTEKGAYLITEDFLSAI 424


>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
 Frame = +3

Query: 51  CVECIDSGKMTKDLVICIHG--LANTKEGMFLHTEDFLEAIAEQLERK 188
           C+E +++G +TKDL IC+ G   +      +L+T +FL+ +AE L +K
Sbjct: 362 CIETMEAGFLTKDLAICVKGGNASAVTRTDYLNTFEFLDKLAENLAKK 409


>Z96047-4|CAB09414.1|  796|Caenorhabditis elegans Hypothetical
           protein DY3.5 protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 413 FGLSPVSSPTS*GYAEIASQGYQHR*EKKAGPSNM 309
           +G SP S PTS  Y +  +Q YQ   +  A  SN+
Sbjct: 203 YGESPSSFPTSFTYTQPETQSYQPSQQSSASSSNL 237


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = -1

Query: 213 LCVFICRPTCVP---AARRSPPGNLRCVKTYLLSCSP 112
           +C+ IC+P C P   A   + P  L CV     +C P
Sbjct: 389 VCISICQPACDPGCVAIYTTTPAPLHCVSQCQPACLP 425


>U49944-3|AAM51525.1|  341|Caenorhabditis elegans Mesodermal lineage
           specificationprotein 2 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 642 KGHNDT*FTFCLSEFQQGPRSPSS-SNPSLETKGSTSELTHRHSPLSFSPDL 490
           K  +D    F +SE  +  R P++ S+PS  ++ ST+E+       +F P +
Sbjct: 42  KPSSDNKIKFNISELLEDDRKPTTQSSPSASSEDSTNEIEQTAFNFNFDPKM 93


>U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical
           protein F35A5.4 protein.
          Length = 524

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 198 CRPTCVPAARRSPPGNLRCVKTYLLSCSP 112
           C   C+P    S    L CV+T + +CSP
Sbjct: 348 CAAQCMPLCESSCIARLSCVQTCMPACSP 376


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,078,898
Number of Sequences: 27780
Number of extensions: 323045
Number of successful extensions: 883
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)