Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_N07
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209732-1|BAD92969.1| 630|Homo sapiens replication protein A1,... 261 2e-69
M63488-1|AAA36584.1| 616|Homo sapiens replication protein A, 70... 259 7e-69
BC018126-1|AAH18126.1| 616|Homo sapiens replication protein A1,... 259 7e-69
AY599563-1|AAS94324.1| 616|Homo sapiens replication protein A1,... 259 7e-69
AL499628-1|CAM28376.1| 442|Homo sapiens novel protein protein. 37 0.093
AL031722-1|CAM26474.1| 442|Homo sapiens novel protein protein. 37 0.093
BC035234-1|AAH35234.1| 343|Homo sapiens ankyrin repeat domain 5... 30 8.0
AY393397-1|AAR32450.1| 149|Homo sapiens immunoglobulin heavy ch... 30 8.0
AK093479-1|BAC04181.1| 530|Homo sapiens protein ( Homo sapiens ... 30 8.0
AB007918-1|BAA32294.2| 1628|Homo sapiens KIAA0449 protein protein. 30 8.0
>AB209732-1|BAD92969.1| 630|Homo sapiens replication protein A1,
70kDa variant protein.
Length = 630
Score = 261 bits (639), Expect = 2e-69
Identities = 114/245 (46%), Positives = 172/245 (70%), Gaps = 1/245 (0%)
Frame = +1
Query: 43 DESAVPTVQYDFLPISEIANKETETLIDLIGVCKSASDVQELTAKSTGKLLKKREVMLVD 222
D+ +PTVQ+DF I ++ NK ++L+D+IG+CKS D ++T +S + + KR + L+D
Sbjct: 305 DDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMD 364
Query: 223 ASGGAVTLTLWGNEAEKFEGNTNPILAVKGARLTEFNGSKSLSCLWSTMLRLNPDVPEAH 402
ASG VT TLWG +A+KF+G+ P+LA+KGAR+++F G +SLS L S+ + NPD+PEA+
Sbjct: 365 ASGKVVTATLWGEDADKFDGSRQPVLAIKGARVSDFGG-RSLSVLSSSTIIANPDIPEAY 423
Query: 403 KLRGWYDNGGADADIVNIS-AKSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLT 579
KLRGW+D G D V+IS KSG G + W + E +S LG G+K DY+S + +
Sbjct: 424 KLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVV 483
Query: 580 FTFSENAVYKACPQEQCNKKLVDQENGLFRCEKCNXEYPNYKHRILLAANVSXPTGDQRV 759
+ EN +Y+ACP + CNKK++DQ+NGL+RCEKC+ E+PN+K+R++L+ N++ +Q V
Sbjct: 484 YLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWV 543
Query: 760 TLFNE 774
T F E
Sbjct: 544 TCFQE 548
>M63488-1|AAA36584.1| 616|Homo sapiens replication protein A, 70-kDa
subunit protein.
Length = 616
Score = 259 bits (635), Expect = 7e-69
Identities = 113/245 (46%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Frame = +1
Query: 43 DESAVPTVQYDFLPISEIANKETETLIDLIGVCKSASDVQELTAKSTGKLLKKREVMLVD 222
D+ +PTVQ+DF I ++ NK ++L+D+IG+CKS D ++T +S + + KR + L+D
Sbjct: 291 DDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMD 350
Query: 223 ASGGAVTLTLWGNEAEKFEGNTNPILAVKGARLTEFNGSKSLSCLWSTMLRLNPDVPEAH 402
SG VT TLWG +A+KF+G+ P+LA+KGAR+++F G +SLS L S+ + NPD+PEA+
Sbjct: 351 TSGKVVTATLWGEDADKFDGSRQPVLAIKGARVSDFGG-RSLSVLSSSTIIANPDIPEAY 409
Query: 403 KLRGWYDNGGADADIVNIS-AKSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLT 579
KLRGW+D G D V+IS KSG G + W + E +S LG G+K DY+S + +
Sbjct: 410 KLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVV 469
Query: 580 FTFSENAVYKACPQEQCNKKLVDQENGLFRCEKCNXEYPNYKHRILLAANVSXPTGDQRV 759
+ EN +Y+ACP + CNKK++DQ+NGL+RCEKC+ E+PN+K+R++L+ N++ +Q V
Sbjct: 470 YLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWV 529
Query: 760 TLFNE 774
T F E
Sbjct: 530 TCFQE 534
>BC018126-1|AAH18126.1| 616|Homo sapiens replication protein A1,
70kDa protein.
Length = 616
Score = 259 bits (635), Expect = 7e-69
Identities = 113/245 (46%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Frame = +1
Query: 43 DESAVPTVQYDFLPISEIANKETETLIDLIGVCKSASDVQELTAKSTGKLLKKREVMLVD 222
D+ +PTVQ+DF I ++ NK ++L+D+IG+CKS D ++T +S + + KR + L+D
Sbjct: 291 DDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMD 350
Query: 223 ASGGAVTLTLWGNEAEKFEGNTNPILAVKGARLTEFNGSKSLSCLWSTMLRLNPDVPEAH 402
SG VT TLWG +A+KF+G+ P+LA+KGAR+++F G +SLS L S+ + NPD+PEA+
Sbjct: 351 TSGKVVTATLWGEDADKFDGSRQPVLAIKGARVSDFGG-RSLSVLSSSTIIANPDIPEAY 409
Query: 403 KLRGWYDNGGADADIVNIS-AKSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLT 579
KLRGW+D G D V+IS KSG G + W + E +S LG G+K DY+S + +
Sbjct: 410 KLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVV 469
Query: 580 FTFSENAVYKACPQEQCNKKLVDQENGLFRCEKCNXEYPNYKHRILLAANVSXPTGDQRV 759
+ EN +Y+ACP + CNKK++DQ+NGL+RCEKC+ E+PN+K+R++L+ N++ +Q V
Sbjct: 470 YLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWV 529
Query: 760 TLFNE 774
T F E
Sbjct: 530 TCFQE 534
>AY599563-1|AAS94324.1| 616|Homo sapiens replication protein A1,
70kDa protein.
Length = 616
Score = 259 bits (635), Expect = 7e-69
Identities = 113/245 (46%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Frame = +1
Query: 43 DESAVPTVQYDFLPISEIANKETETLIDLIGVCKSASDVQELTAKSTGKLLKKREVMLVD 222
D+ +PTVQ+DF I ++ NK ++L+D+IG+CKS D ++T +S + + KR + L+D
Sbjct: 291 DDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMD 350
Query: 223 ASGGAVTLTLWGNEAEKFEGNTNPILAVKGARLTEFNGSKSLSCLWSTMLRLNPDVPEAH 402
SG VT TLWG +A+KF+G+ P+LA+KGAR+++F G +SLS L S+ + NPD+PEA+
Sbjct: 351 TSGKVVTATLWGEDADKFDGSRQPVLAIKGARVSDFGG-RSLSVLSSSTIIANPDIPEAY 409
Query: 403 KLRGWYDNGGADADIVNIS-AKSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLT 579
KLRGW+D G D V+IS KSG G + W + E +S LG G+K DY+S + +
Sbjct: 410 KLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVV 469
Query: 580 FTFSENAVYKACPQEQCNKKLVDQENGLFRCEKCNXEYPNYKHRILLAANVSXPTGDQRV 759
+ EN +Y+ACP + CNKK++DQ+NGL+RCEKC+ E+PN+K+R++L+ N++ +Q V
Sbjct: 470 YLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWV 529
Query: 760 TLFNE 774
T F E
Sbjct: 530 TCFQE 534
>AL499628-1|CAM28376.1| 442|Homo sapiens novel protein protein.
Length = 442
Score = 36.7 bits (81), Expect = 0.093
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +1
Query: 118 LIDLIGVCKSASDVQELTAKSTGKLLKKREVMLVDASGGAVTLTLWGNEAEKFEGNTNPI 297
+I+++ KS + + T K ++ EV L D + + +T W NE+ + P
Sbjct: 167 IINVLAAVKSVGEPKYFTTSDRRKG-QRCEVRLYDETESSFAMTCWDNESILLAQSWMPR 225
Query: 298 LAVKGARLTEFNGSKSLSCLWS-----TMLRLNPDVPEAHKL 408
V A N K +C+ + T++ NPD+PEA+ L
Sbjct: 226 ETVIFASDVRINFDKFRNCMTATVISKTIITTNPDIPEANIL 267
>AL031722-1|CAM26474.1| 442|Homo sapiens novel protein protein.
Length = 442
Score = 36.7 bits (81), Expect = 0.093
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +1
Query: 118 LIDLIGVCKSASDVQELTAKSTGKLLKKREVMLVDASGGAVTLTLWGNEAEKFEGNTNPI 297
+I+++ KS + + T K ++ EV L D + + +T W NE+ + P
Sbjct: 167 IINVLAAVKSVGEPKYFTTSDRRKG-QRCEVRLYDETESSFAMTCWDNESILLAQSWMPR 225
Query: 298 LAVKGARLTEFNGSKSLSCLWS-----TMLRLNPDVPEAHKL 408
V A N K +C+ + T++ NPD+PEA+ L
Sbjct: 226 ETVIFASDVRINFDKFRNCMTATVISKTIITTNPDIPEANIL 267
>BC035234-1|AAH35234.1| 343|Homo sapiens ankyrin repeat domain 53
protein.
Length = 343
Score = 30.3 bits (65), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 521 LSASENDIHSFEPPVKLPDLADMLTMSASAPPLSYQPLSL 402
L A+ D S +P LPDLAD L+ A+A +P SL
Sbjct: 44 LKATWTDAESKQPSQPLPDLADHLSAQATALARPRRPASL 83
>AY393397-1|AAR32450.1| 149|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 149
Score = 30.3 bits (65), Expect = 8.0
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +2
Query: 422 TTEGQMPTSSTYL--LSRVTSRVVRMNGYRFRKPRAVNW----APVRKAITTVSSAY*RL 583
T++ Q+ + T + + T RM+GY R +NW P + I + +S
Sbjct: 63 TSKSQVVLTMTNMDPVDTATYYCARMSGYSSRTATILNWFDPWGPGTRVIVSSASTKGPS 122
Query: 584 RFPKMPCTRHVRKNSATRNLSIK 652
FP PC+R +++A +K
Sbjct: 123 VFPLAPCSRSTSESTAALGCLVK 145
>AK093479-1|BAC04181.1| 530|Homo sapiens protein ( Homo sapiens
cDNA FLJ36160 fis, clone TESTI2025872. ).
Length = 530
Score = 30.3 bits (65), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 521 LSASENDIHSFEPPVKLPDLADMLTMSASAPPLSYQPLSL 402
L A+ D S +P LPDLAD L+ A+A +P SL
Sbjct: 44 LKATWTDAESKQPSQPLPDLADHLSAQATALARPRRPASL 83
>AB007918-1|BAA32294.2| 1628|Homo sapiens KIAA0449 protein protein.
Length = 1628
Score = 30.3 bits (65), Expect = 8.0
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 175 KSTGKLLKKREVMLVDASGGAVTLTLWGNEAEKFEGNTNPILAVKGARLTEFNGSKSLSC 354
+S G L K + V + GA T L EG+T PIL + F GSK SC
Sbjct: 1264 QSQGSALDKGIISPVGGAKGARTAPL--QCVSMAEGHTKPILCLDATDELLFTGSKDRSC 1321
Query: 355 -LWS 363
+W+
Sbjct: 1322 KMWN 1325
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.131 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,375,813
Number of Sequences: 237096
Number of extensions: 2172330
Number of successful extensions: 3704
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3694
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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