Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_N07
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41535-4|AAB63407.1|  655|Caenorhabditis elegans Hypothetical pr...   126   1e-29
U29382-4|AAG00002.2|  324|Caenorhabditis elegans Hypothetical pr...    32   0.40 
AF016442-9|AAB65921.1|  714|Caenorhabditis elegans Hypothetical ...    31   0.69 
AL132948-29|CAD31829.1|  314|Caenorhabditis elegans Hypothetical...    29   3.7  

>U41535-4|AAB63407.1|  655|Caenorhabditis elegans Hypothetical protein
            F18A1.5 protein.
          Length = 655

 Score =  126 bits (305), Expect = 1e-29
 Identities = 85/249 (34%), Positives = 126/249 (50%), Gaps = 4/249 (1%)
 Frame = +1

Query: 40   GDESAVPTVQYDFLPISEIANKETETLIDLIGVCKSASDVQELTAKSTGKLLKKREVMLV 219
            G+  A P +    + + EIA    + +  L+ V K   +  E T+K+ GK L KRE+ L+
Sbjct: 328  GELLAAPKLILKRVKLGEIAGYAGQLIDVLVVVEKMDPEATEFTSKA-GKSLIKREMELI 386

Query: 220  DASGGAVTLTLWGNEAEK--FEGNTNPILAVKGARLTEFNGSKSLSCLWSTMLRLNPDVP 393
            D SG  V LTLWG+EA K   +     ++A KG    EFNG  SL    +T +   P++ 
Sbjct: 387  DESGALVRLTLWGDEATKALVDDYVQKVIAFKGVIPREFNGGFSLGTGSATRIISVPEIA 446

Query: 394  EAHKLRGWYDNGGADADIVNISAKSGNFTGGSNEW-ISFSEAESRQLG-TGEKGDYYSLL 567
               +L  WY N     ++  +S  +    GGSNE   + +  +  Q G   +KGDY ++ 
Sbjct: 447  GVSELYDWYANVKPTTEVKMMSQAA----GGSNEAPRTIAGLQEMQFGKDSDKGDYATVK 502

Query: 568  GVLTFTFSENAVYKACPQEQCNKKLVDQENGLFRCEKCNXEYPNYKHRILLAANVSXPTG 747
             ++T     NA+Y+ C  E C KKLV  ENG +RCEKCN     +K   ++   +S  TG
Sbjct: 503  AMITRVNPTNALYRGCASEGCQKKLVG-ENGDYRCEKCNKNMNKFKWLYMMQFELSDETG 561

Query: 748  DQRVTLFNE 774
               VT F +
Sbjct: 562  QVYVTAFGD 570


>U29382-4|AAG00002.2|  324|Caenorhabditis elegans Hypothetical
           protein R03H10.6 protein.
          Length = 324

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
 Frame = +1

Query: 55  VPTVQYDFLPISEIANKET-ETLIDLIGVCKSASDVQELTAKSTGKLLKKREVMLVDASG 231
           VP +  + + +  + N++     ID+I   +  +D  +       K    R ++++D S 
Sbjct: 226 VPKLNLNRVMLCNVQNEQYYRKPIDVIVAVEEINDFLDDYHPIENKPPVLRNMVVIDDSN 285

Query: 232 GAVTLTLWGNEA--EKFEGNTNPILAVKGARLTEFNG 336
             + LTLWG  A     E   N I+A KG   T+F G
Sbjct: 286 FRIRLTLWGYRAMDSGVEEFQNKIVAFKGIVPTQFEG 322


>AF016442-9|AAB65921.1|  714|Caenorhabditis elegans Hypothetical
           protein K12B6.8 protein.
          Length = 714

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +1

Query: 628 CNKKLVDQENGLFRCEKCNXEYPNYKHRILLAANVSXPTGDQRVTLFNE 774
           C+ +++  +    +CE+C           LL  +V  PT  QR+ LF+E
Sbjct: 658 CHDEIMTNDKSAIKCERCTKSIHEKCAAPLLQQSVMCPTCKQRMLLFSE 706


>AL132948-29|CAD31829.1|  314|Caenorhabditis elegans Hypothetical
           protein Y39B6A.37 protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 412 GWYDNGGADADIVNISAKSG-NFTGGSNEWISFSEAESRQLGTGEKGDYYS 561
           GWY   G + + V ISA  G   +  S+E      AE+R+ G GE   + S
Sbjct: 67  GWYVGYGVEYNGVGISAAGGAPDSSASSESGDLPPAENREAGGGESSGFDS 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.313    0.131    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,776,561
Number of Sequences: 27780
Number of extensions: 345144
Number of successful extensions: 740
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)