BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_N03
(451 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069748-1|AAL39893.1| 772|Drosophila melanogaster LP08717p pro... 31 0.94
AE014296-2|AAF47324.1| 772|Drosophila melanogaster CG6821-PA pr... 31 0.94
>AY069748-1|AAL39893.1| 772|Drosophila melanogaster LP08717p
protein.
Length = 772
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 144 EMSWYVPSNLFKFLYIIYVITY*KYFDTTY 55
E ++VP+ FK + + YV T+ KYF+ Y
Sbjct: 731 ESDFFVPNGFFKDVKVYYVDTFAKYFEKKY 760
>AE014296-2|AAF47324.1| 772|Drosophila melanogaster CG6821-PA
protein.
Length = 772
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 144 EMSWYVPSNLFKFLYIIYVITY*KYFDTTY 55
E ++VP+ FK + + YV T+ KYF+ Y
Sbjct: 731 ESDFFVPNGFFKDVKVYYVDTFAKYFEKKY 760
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,095,386
Number of Sequences: 53049
Number of extensions: 190628
Number of successful extensions: 368
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -