Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_M24
(829 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y18863-1|CAB39167.1| 220|Homo sapiens Pop4 protein protein. 97 9e-20
CR536569-1|CAG38806.1| 220|Homo sapiens POP4 protein. 97 9e-20
BC006098-1|AAH06098.1| 220|Homo sapiens processing of precursor... 97 9e-20
BC004438-1|AAH04438.1| 220|Homo sapiens processing of precursor... 97 9e-20
AF001176-1|AAD00893.2| 220|Homo sapiens ribonuclease P protein ... 95 2e-19
D86957-1|BAA13193.1| 508|Homo sapiens KIAA0202 protein. 33 1.7
AF440763-1|AAO13880.1| 453|Homo sapiens septin SEPT8_v3 protein. 33 1.7
AF440762-1|AAO13879.1| 562|Homo sapiens septin SEPT8_v2 protein. 33 1.7
AF440761-1|AAO13878.1| 508|Homo sapiens septin SEPT8_v1* protein. 33 1.7
AF179995-1|AAG09407.1| 508|Homo sapiens septin 2 protein. 33 1.7
>Y18863-1|CAB39167.1| 220|Homo sapiens Pop4 protein protein.
Length = 220
Score = 96.7 bits (230), Expect = 9e-20
Identities = 55/202 (27%), Positives = 107/202 (52%)
Frame = +1
Query: 142 QQAANSIINFLKTNVPKNEVQKIDSELKTELVFAXXXXXXXXXXXXXXXTRCLTRKEKKT 321
Q+A + FLK + P+ Q + +L+ + V + L+ ++++
Sbjct: 25 QRAEAFVRAFLKRSTPRMSPQAREDQLQRKAV-VLEYFTRHKRKEKKKKAKGLSARQRRE 83
Query: 322 LRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGC 501
LR ++I +Y + ++++W +YI ++ + G+ +P+++ + + L KAD HG
Sbjct: 84 LRLFDIKPEQQRYSLFLPLHELWKQYIRDLCS---GL-KPDTQP-QMIQAKLLKADLHGA 138
Query: 502 MLTVVRSKCPSFINKTGICIMDTKNTFKIVSXDNIVTTIPKKECVFELYLKKFKVTLFGK 681
+++V +SKCPS++ TGI + +TK+ FKI++ ++ + IPK CVF + F ++G
Sbjct: 139 IISVTKSKCPSYVGITGILLQETKHIFKIITKEDRLKVIPKLNCVFTVETDGFISYIYGS 198
Query: 682 LLCAKPAERSTKKIKGXLXPDL 747
+ +ERS KK K DL
Sbjct: 199 KFQLRSSERSAKKFKAKGTIDL 220
>CR536569-1|CAG38806.1| 220|Homo sapiens POP4 protein.
Length = 220
Score = 96.7 bits (230), Expect = 9e-20
Identities = 55/202 (27%), Positives = 107/202 (52%)
Frame = +1
Query: 142 QQAANSIINFLKTNVPKNEVQKIDSELKTELVFAXXXXXXXXXXXXXXXTRCLTRKEKKT 321
Q+A + FLK + P+ Q + +L+ + V + L+ ++++
Sbjct: 25 QRAEAFVRAFLKRSTPRMSPQAREDQLQRKAV-VLEYFTRHKRKEKKKKAKGLSARQRRE 83
Query: 322 LRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGC 501
LR ++I +Y + ++++W +YI ++ + G+ +P+++ + + L KAD HG
Sbjct: 84 LRLFDIKPEQQRYSLFLPLHELWKQYIRDLCS---GL-KPDTQP-QMIQAKLLKADLHGA 138
Query: 502 MLTVVRSKCPSFINKTGICIMDTKNTFKIVSXDNIVTTIPKKECVFELYLKKFKVTLFGK 681
+++V +SKCPS++ TGI + +TK+ FKI++ ++ + IPK CVF + F ++G
Sbjct: 139 IISVTKSKCPSYVGITGILLQETKHIFKIITKEDRLKVIPKLNCVFTVETDGFISYIYGS 198
Query: 682 LLCAKPAERSTKKIKGXLXPDL 747
+ +ERS KK K DL
Sbjct: 199 KFQLRSSERSAKKFKAKGTIDL 220
>BC006098-1|AAH06098.1| 220|Homo sapiens processing of precursor 4,
ribonuclease P/MRP subunit (S. cerevisiae) protein.
Length = 220
Score = 96.7 bits (230), Expect = 9e-20
Identities = 55/202 (27%), Positives = 107/202 (52%)
Frame = +1
Query: 142 QQAANSIINFLKTNVPKNEVQKIDSELKTELVFAXXXXXXXXXXXXXXXTRCLTRKEKKT 321
Q+A + FLK + P+ Q + +L+ + V + L+ ++++
Sbjct: 25 QRAEAFVRAFLKRSTPRMSPQAREDQLQRKAV-VLEYFTRHKRKEKKKKAKGLSARQRRE 83
Query: 322 LRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGC 501
LR ++I +Y + ++++W +YI ++ + G+ +P+++ + + L KAD HG
Sbjct: 84 LRLFDIKPEQQRYSLFLPLHELWKQYIRDLCS---GL-KPDTQP-QMIQAKLLKADLHGA 138
Query: 502 MLTVVRSKCPSFINKTGICIMDTKNTFKIVSXDNIVTTIPKKECVFELYLKKFKVTLFGK 681
+++V +SKCPS++ TGI + +TK+ FKI++ ++ + IPK CVF + F ++G
Sbjct: 139 IISVTKSKCPSYVGITGILLQETKHIFKIITKEDRLKVIPKLNCVFTVETDGFISYIYGS 198
Query: 682 LLCAKPAERSTKKIKGXLXPDL 747
+ +ERS KK K DL
Sbjct: 199 KFQLRSSERSAKKFKAKGTIDL 220
>BC004438-1|AAH04438.1| 220|Homo sapiens processing of precursor 4,
ribonuclease P/MRP subunit (S. cerevisiae) protein.
Length = 220
Score = 96.7 bits (230), Expect = 9e-20
Identities = 55/202 (27%), Positives = 107/202 (52%)
Frame = +1
Query: 142 QQAANSIINFLKTNVPKNEVQKIDSELKTELVFAXXXXXXXXXXXXXXXTRCLTRKEKKT 321
Q+A + FLK + P+ Q + +L+ + V + L+ ++++
Sbjct: 25 QRAEAFVRAFLKRSTPRMSPQAREDQLQRKAV-VLEYFTRHKRKEKKKKAKGLSARQRRE 83
Query: 322 LRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGC 501
LR ++I +Y + ++++W +YI ++ + G+ +P+++ + + L KAD HG
Sbjct: 84 LRLFDIKPEQQRYSLFLPLHELWKQYIRDLCS---GL-KPDTQP-QMIQAKLLKADLHGA 138
Query: 502 MLTVVRSKCPSFINKTGICIMDTKNTFKIVSXDNIVTTIPKKECVFELYLKKFKVTLFGK 681
+++V +SKCPS++ TGI + +TK+ FKI++ ++ + IPK CVF + F ++G
Sbjct: 139 IISVTKSKCPSYVGITGILLQETKHIFKIITKEDRLKVIPKLNCVFTVETDGFISYIYGS 198
Query: 682 LLCAKPAERSTKKIKGXLXPDL 747
+ +ERS KK K DL
Sbjct: 199 KFQLRSSERSAKKFKAKGTIDL 220
>AF001176-1|AAD00893.2| 220|Homo sapiens ribonuclease P protein
subunit p29 protein.
Length = 220
Score = 95.5 bits (227), Expect = 2e-19
Identities = 55/202 (27%), Positives = 106/202 (52%)
Frame = +1
Query: 142 QQAANSIINFLKTNVPKNEVQKIDSELKTELVFAXXXXXXXXXXXXXXXTRCLTRKEKKT 321
Q+A + FLK P+ Q + +L+ + V + L+ ++++
Sbjct: 25 QRAEAFVRAFLKRTSPRMSPQAREDQLQRKAV-VLEYFTRHKRKEKKKKAKGLSARQRRE 83
Query: 322 LRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGC 501
LR ++I +Y + ++++W +YI ++ + G+ +P+++ + + L KAD HG
Sbjct: 84 LRLFDIKPEQQRYSLFLPLHELWKQYIRDLCS---GL-KPDTQP-QMIQAKLLKADLHGA 138
Query: 502 MLTVVRSKCPSFINKTGICIMDTKNTFKIVSXDNIVTTIPKKECVFELYLKKFKVTLFGK 681
+++V +SKCPS++ TGI + +TK+ FKI++ ++ + IPK CVF + F ++G
Sbjct: 139 IISVTKSKCPSYVGITGILLQETKHIFKIITKEDRLKVIPKLNCVFTVETDGFISYIYGS 198
Query: 682 LLCAKPAERSTKKIKGXLXPDL 747
+ +ERS KK K DL
Sbjct: 199 KFQLRSSERSAKKFKAKGTIDL 220
>D86957-1|BAA13193.1| 508|Homo sapiens KIAA0202 protein.
Length = 508
Score = 32.7 bits (71), Expect = 1.7
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 487 DYHGCMLTVVRSKCPSFINKTGICI--MDTKNTFKIVSXDNIVTTIPKKECVFELYLKKF 660
DYH + V C FI TG + +D K+ S NI+ I K + + + L KF
Sbjct: 223 DYHDTRIHV----CLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKSELHKF 278
Query: 661 KVTLFGKLL 687
K+ + G+L+
Sbjct: 279 KIKIMGELV 287
>AF440763-1|AAO13880.1| 453|Homo sapiens septin SEPT8_v3 protein.
Length = 453
Score = 32.7 bits (71), Expect = 1.7
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 487 DYHGCMLTVVRSKCPSFINKTGICI--MDTKNTFKIVSXDNIVTTIPKKECVFELYLKKF 660
DYH + V C FI TG + +D K+ S NI+ I K + + + L KF
Sbjct: 168 DYHDTRIHV----CLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKSELHKF 223
Query: 661 KVTLFGKLL 687
K+ + G+L+
Sbjct: 224 KIKIMGELV 232
>AF440762-1|AAO13879.1| 562|Homo sapiens septin SEPT8_v2 protein.
Length = 562
Score = 32.7 bits (71), Expect = 1.7
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 487 DYHGCMLTVVRSKCPSFINKTGICI--MDTKNTFKIVSXDNIVTTIPKKECVFELYLKKF 660
DYH + V C FI TG + +D K+ S NI+ I K + + + L KF
Sbjct: 223 DYHDTRIHV----CLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKSELHKF 278
Query: 661 KVTLFGKLL 687
K+ + G+L+
Sbjct: 279 KIKIMGELV 287
>AF440761-1|AAO13878.1| 508|Homo sapiens septin SEPT8_v1* protein.
Length = 508
Score = 32.7 bits (71), Expect = 1.7
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 487 DYHGCMLTVVRSKCPSFINKTGICI--MDTKNTFKIVSXDNIVTTIPKKECVFELYLKKF 660
DYH + V C FI TG + +D K+ S NI+ I K + + + L KF
Sbjct: 223 DYHDTRIHV----CLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKSELHKF 278
Query: 661 KVTLFGKLL 687
K+ + G+L+
Sbjct: 279 KIKIMGELV 287
>AF179995-1|AAG09407.1| 508|Homo sapiens septin 2 protein.
Length = 508
Score = 32.7 bits (71), Expect = 1.7
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 487 DYHGCMLTVVRSKCPSFINKTGICI--MDTKNTFKIVSXDNIVTTIPKKECVFELYLKKF 660
DYH + V C FI TG + +D K+ S NI+ I K + + + L KF
Sbjct: 223 DYHDTRIHV----CLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKSELHKF 278
Query: 661 KVTLFGKLL 687
K+ + G+L+
Sbjct: 279 KIKIMGELV 287
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,885,205
Number of Sequences: 237096
Number of extensions: 2310438
Number of successful extensions: 3360
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3355
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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