Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_M24
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81034-5|CAB02730.1| 198|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U40028-3|AAW57826.1| 378|Caenorhabditis elegans Fucosyl transfe... 33 0.25
AJ745073-1|CAG32979.1| 378|Caenorhabditis elegans alpha1,3-fuco... 33 0.25
Z66498-5|CAA91294.2| 513|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z54327-14|CAA91124.2| 513|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81508-1|CAB04142.1| 331|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 28 7.1
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 28 7.1
U13070-10|AAC46644.3| 294|Caenorhabditis elegans Hypothetical p... 28 9.4
U13070-9|AAU05578.1| 388|Caenorhabditis elegans Hypothetical pr... 28 9.4
U13070-8|AAN84828.1| 433|Caenorhabditis elegans Hypothetical pr... 28 9.4
AB079783-1|BAB84821.1| 433|Caenorhabditis elegans endo-beta-N-a... 28 9.4
>Z81034-5|CAB02730.1| 198|Caenorhabditis elegans Hypothetical
protein C15C6.4 protein.
Length = 198
Score = 70.1 bits (164), Expect = 2e-12
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Frame = +1
Query: 343 RHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGCMLTVVRS 522
+ + K+ D+V MN W +Y E L N + + ++ K+DYHG +LT+ +
Sbjct: 57 KKAFKFADIVPMNTDWQKYFRERLG--------NHFSSTKIEKTILKSDYHGALLTIWLA 108
Query: 523 KCPSFINKTGICIMDTKNTFKIVSXDNIVTTIPKKECVFELYLKKFKVTLFGKLLCAKPA 702
+ P+ I +GI +++T++TF++V+ ++ IPKK VF L +LFG + +PA
Sbjct: 109 ENPTQIGISGIVVLETRHTFQMVTQEDRFVVIPKKGSVFRFILGDRLFSLFGDGMRTRPA 168
Query: 703 ERSTK-KIKGXL 735
R K +IK L
Sbjct: 169 WRGKKPRIKRLL 180
>U40028-3|AAW57826.1| 378|Caenorhabditis elegans Fucosyl
transferase protein 5 protein.
Length = 378
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 514 VRSKCPSFINKTGICIMDTKNTFKIVSXDNIVTTIPKKECVFELYLKKFKVTLFGKLLCA 693
V+S P+ +N + I TK T +VS N +KE V +L K + L+G+L
Sbjct: 162 VKSYVPAEVNYSEIWNSKTKETLWMVSNGNAQNK--RKELVEKLIKKGMSIDLYGQLYKK 219
Query: 694 KPAE 705
+PAE
Sbjct: 220 EPAE 223
>AJ745073-1|CAG32979.1| 378|Caenorhabditis elegans
alpha1,3-fucosyltransferase homologueprotein.
Length = 378
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 514 VRSKCPSFINKTGICIMDTKNTFKIVSXDNIVTTIPKKECVFELYLKKFKVTLFGKLLCA 693
V+S P+ +N + I TK T +VS N +KE V +L K + L+G+L
Sbjct: 162 VKSYVPAEVNYSEIWNSKTKETLWMVSNGNAQNK--RKELVEKLIKKGMSIDLYGQLYKK 219
Query: 694 KPAE 705
+PAE
Sbjct: 220 EPAE 223
>Z66498-5|CAA91294.2| 513|Caenorhabditis elegans Hypothetical
protein C26D10.6a protein.
Length = 513
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 445 SKNWETLTLSLYKADYHGCMLTVVRSK 525
S+NWE++ L Y YHG ++ V+ +
Sbjct: 261 SRNWESMLLGTYHRVYHGSWISSVKGR 287
>Z54327-14|CAA91124.2| 513|Caenorhabditis elegans Hypothetical
protein C26D10.6a protein.
Length = 513
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 445 SKNWETLTLSLYKADYHGCMLTVVRSK 525
S+NWE++ L Y YHG ++ V+ +
Sbjct: 261 SRNWESMLLGTYHRVYHGSWISSVKGR 287
>Z81508-1|CAB04142.1| 331|Caenorhabditis elegans Hypothetical
protein F20E11.1 protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = -3
Query: 311 SLRVKHLVFFLIGLRFCCLLRFFAKTSSVFNS--ESIFWTS--FLGTFVLRKLMIEFAA 147
S+++KHL F +I F C + K ++ F + +++ W FL T+ + +++ +A
Sbjct: 147 SIKIKHLYFVIIAKDFSCFVFTVWKRNAAFQTVFQNLTWVDFFFLMTWCINDIIVFISA 205
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 97 LTFRCKMEETTDSFNQQAANSIINFLKTN 183
+ +RC EET +++ N II F K N
Sbjct: 656 IVYRCAFEETKEAYKVTVNNEIITFEKDN 684
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 97 LTFRCKMEETTDSFNQQAANSIINFLKTN 183
+ +RC EET +++ N II F K N
Sbjct: 656 IVYRCAFEETKEAYKVTVNNEIITFEKDN 684
>U13070-10|AAC46644.3| 294|Caenorhabditis elegans Hypothetical
protein F01F1.10a protein.
Length = 294
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 626 KNVYSNCI*KNSKLHYLGSCCVQNQLNALXRKSKDXCXLIY 748
K ++ + + N KLH+ QN+LN + RK D C IY
Sbjct: 184 KVIWYDSVLDNGKLHW------QNELNEMNRKFYDACDAIY 218
>U13070-9|AAU05578.1| 388|Caenorhabditis elegans Hypothetical
protein F01F1.10c protein.
Length = 388
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 626 KNVYSNCI*KNSKLHYLGSCCVQNQLNALXRKSKDXCXLIY 748
K ++ + + N KLH+ QN+LN + RK D C IY
Sbjct: 139 KVIWYDSVLDNGKLHW------QNELNEMNRKFYDACDAIY 173
>U13070-8|AAN84828.1| 433|Caenorhabditis elegans Hypothetical
protein F01F1.10b protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 626 KNVYSNCI*KNSKLHYLGSCCVQNQLNALXRKSKDXCXLIY 748
K ++ + + N KLH+ QN+LN + RK D C IY
Sbjct: 184 KVIWYDSVLDNGKLHW------QNELNEMNRKFYDACDAIY 218
>AB079783-1|BAB84821.1| 433|Caenorhabditis elegans
endo-beta-N-acetylglucosaminidase protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 626 KNVYSNCI*KNSKLHYLGSCCVQNQLNALXRKSKDXCXLIY 748
K ++ + + N KLH+ QN+LN + RK D C IY
Sbjct: 184 KVIWYDSVLDNGKLHW------QNELNEMNRKFYDACDAIY 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,216,738
Number of Sequences: 27780
Number of extensions: 397440
Number of successful extensions: 1004
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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