Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_M21
(794 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 27 2.3
SPAC1610.01 ||SPAC17A5.17|conserved fungal protein|Schizosacchar... 27 2.3
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 27 2.3
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 27 2.3
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 27 3.1
SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase |Schizosacc... 27 3.1
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 27 4.1
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 26 5.4
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 26 5.4
SPBC776.03 |||homoserine dehydrogenase |Schizosaccharomyces pomb... 26 7.1
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 25 9.4
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 25 9.4
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 27.5 bits (58), Expect = 2.3
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +1
Query: 172 DLGIKPLDPLHISVING----NQG--GLELTFKDTIVRGLSGCHVEGVKNDPAKKKQAVT 333
+L I L P+H ++I+ N G G K T+V+ +SG H KN+ ++ +T
Sbjct: 4 NLDISELSPIHPAIISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNE---LERNIT 60
Query: 334 IKCSVTLTGDYKLSGK 381
IK YK S +
Sbjct: 61 IKLGYANAKIYKCSNE 76
>SPAC1610.01 ||SPAC17A5.17|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 217
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = -3
Query: 486 AVSSCHC-HQIVCSLDHDVSYFDI--VFSFAFNGKHQQFTAKFVITS*CHGTFDGDRLLL 316
A+ +C H S D+DV + S F+ HQ TA+ V TS C FD +
Sbjct: 151 ALCTCQSLHPDTFSSDNDVENASMGNPMSLFFDPNHQWVTAENVDTSACDNRFDSPESPV 210
Query: 315 FGW 307
W
Sbjct: 211 LKW 213
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 547 FQFENLFNGNKVLATPVEEFVNSNW 621
F ++ N N + TPVE VNS W
Sbjct: 196 FLYDFTGNANNTVVTPVETAVNSRW 220
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 343 SVTLTGDYKLSGKLLVLPIEGEGKYNIKIRDIVIKTANDLVTVTGADGKPHWHIESWKH- 519
SVT TG K ++ G G + + ++ +ND +T+TG G+ + WK+
Sbjct: 112 SVTTTGLPKFKN---IVDCTGAGDVDTSV-EVAAADSNDYLTITGRSGRTLKLSKEWKNP 167
Query: 520 TYEVKTGAHFQFE 558
+ + K G +E
Sbjct: 168 SKKWKVGCKLAYE 180
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 400 EGEGKYNIKIRDIVIKTANDLVTVTGADGKPHW 498
E + N ++ AN V++ G DG P+W
Sbjct: 143 EARSRANSRVNSRANSRANSSVSLAGMDGSPNW 175
>SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = +1
Query: 397 IEGEGKYNIKIRDIVIKTANDLVTVTGADGKPHWHIESWKHTYE 528
IE Y++ I + +DL+ HW +W +TY+
Sbjct: 392 IEQLQSYSVLINQAIGDAISDLLATISVLNALHWDASAWSNTYK 435
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 547 NELLSSLRTCASTTRYASAVCRQLLSLSPD 458
NEL +LR+ +ST+ +A + QLL LS D
Sbjct: 1023 NELGPNLRSDSSTSHFAFDLAHQLLLLSRD 1052
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 298 KNDPAKKKQAVTIKCSVTLTGDYKLSGKLLVLPIEGEGKYNIKIRD 435
+ +PA+ QA+ IK + + K+SGK+ P+E K KIR+
Sbjct: 411 RRNPARVNQALKIKKPIDMEEYSKVSGKVF-RPVEEMEKELQKIRE 455
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 305 SFLTPST*QPLKPRTMVSLKVNSSPPWFPL 216
SFL P T P+K + + L ++PPW P+
Sbjct: 902 SFLAPQT--PVKSKHALPLVEANAPPWEPI 929
>SPBC776.03 |||homoserine dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 232 GLELTFKDTIVRGLSGCHVEGVKNDPAKKKQAVTIKCSV 348
G+++ K TI+ ++G HVE + P K +K +V
Sbjct: 225 GMDVARKVTILSRIAGVHVESASSFPVKSLIPEPLKSAV 263
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 25.4 bits (53), Expect = 9.4
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 172 DLGIKPLDPLHISVINGNQGGLELTFKDTIVRGLSGCHVEGVKNDPAKKKQAVTIKCSVT 351
D+ I+ P H+ G+ G + +T +DTI+ +G HV+ ND ++ + V ++T
Sbjct: 337 DVSIEKAQPHHL----GSCGSVTVTKEDTIIMKGAGDHVK--VNDRCEQIRGVMADPNLT 390
Query: 352 LTGDYKLSGKLLVL 393
KL +L L
Sbjct: 391 EYEKEKLQERLAKL 404
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +1
Query: 190 LDPLHISVINGNQGGLELTFKDTIVRGLSGCHVEGVKNDPAKKKQAVTIKCSVTLTGD 363
L PL + GGL K ++ G GC + AK+ QA I SV L D
Sbjct: 106 LFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTD 163
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,201,907
Number of Sequences: 5004
Number of extensions: 66576
Number of successful extensions: 154
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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