Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_M21
         (794 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497...    31   1.4  
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615...    30   1.8  
01_04_0102 + 16030094-16030462,16030595-16030714,16031715-160317...    28   7.4  
06_03_0405 - 20464701-20466287                                         28   9.8  
02_05_1165 + 34630369-34630431,34630771-34630855,34631212-346313...    28   9.8  

>02_03_0390 +
           18448671-18448889,18449567-18449632,18449702-18449761,
           18449864-18449959,18452287-18452447,18452669-18452790,
           18452872-18453239,18453653-18453739,18453835-18453969,
           18454349-18454471,18454771-18454854,18455023-18455187,
           18455310-18455486,18455660-18455773,18455912-18456016,
           18457056-18457174,18457244-18457385,18457461-18457555,
           18457757-18457862,18458125-18458204,18458285-18458461,
           18459828-18459912,18460024-18460104,18460208-18460351,
           18460468-18460563,18460654-18460854,18461462-18461895,
           18462417-18462478,18462622-18462872,18462956-18463030,
           18463110-18463300,18463696-18463867,18463956-18464020,
           18464646-18464778,18464861-18464962,18465047-18465130,
           18465656-18465730,18465818-18465877,18465967-18466223,
           18466560-18466608,18466781-18466941,18467013-18467079,
           18467174-18467299,18467422-18467592,18468566-18468769,
           18469059-18469165,18469608-18469737,18469774-18469959,
           18470704-18470742
          Length = 2202

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 510 RLDMPVRFAVSSCHCHQIVCSLDHDVSY 427
           R D+P +F +    C Q++ +LD D+ Y
Sbjct: 606 RSDLPTKFQLEPSACEQLIANLDRDLQY 633


>08_02_0744 -
           20659326-20659580,20659748-20660005,20660103-20661575,
           20661677-20661835,20661948-20662074,20662155-20662486,
           20662574-20663383,20663772-20664110,20664187-20664340,
           20664427-20665143,20665699-20665967
          Length = 1630

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 486 AVSSCHCHQIV-CSLDHDVSYFDIVFSFAF 400
           A  SC  H+I  CSLDHD+   D+V  + +
Sbjct: 629 ATESCKGHKIFPCSLDHDIRTSDMVMQYQY 658


>01_04_0102 +
           16030094-16030462,16030595-16030714,16031715-16031792,
           16032760-16032933,16033844-16033921,16034338-16034510,
           16034757-16034912,16036460-16036621,16036815-16036826,
           16036947-16036962,16037663-16037875
          Length = 516

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 140 RQCRSWPPVFPTWASSPWTRY 202
           R C SW P FPT  SS W  Y
Sbjct: 463 RDC-SWHPYFPTLVSSSWDGY 482


>06_03_0405 - 20464701-20466287
          Length = 528

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 101 KLEIPPVLWLLHKRQCRSWPPVFPTWASSP 190
           K  IPP  WL+HKR   S+ P+  +   +P
Sbjct: 43  KKSIPP--WLIHKRSSSSYTPILKSSIRNP 70


>02_05_1165 +
           34630369-34630431,34630771-34630855,34631212-34631332,
           34631588-34631831,34631922-34632026,34632110-34632154,
           34632243-34632395,34632481-34632762,34632844-34632980,
           34633065-34633152
          Length = 440

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 341 HLMVTACFFLAGSFLT 294
           H+  TAC+F+AGSF T
Sbjct: 227 HMEFTACYFMAGSFRT 242


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,786,780
Number of Sequences: 37544
Number of extensions: 482710
Number of successful extensions: 1203
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)