Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_M18
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 252 1e-66
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 252 1e-66
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 252 1e-66
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 252 1e-66
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 252 1e-66
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 252 1e-66
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 248 1e-65
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 78 2e-14
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 31 3.4
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 59 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 238
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 239 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 418
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 419 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 517
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 59 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 238
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 239 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 418
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 419 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 517
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 59 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 238
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 239 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 418
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 419 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 517
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 59 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 238
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 239 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 418
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 419 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 517
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 59 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 238
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 239 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 418
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 419 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 517
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 59 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 238
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 239 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 418
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 419 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 517
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 248 bits (608), Expect = 1e-65
Identities = 111/153 (72%), Positives = 134/153 (87%)
Frame = +2
Query: 59 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 238
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 239 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 418
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 419 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 517
RRTYRA GRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRARGRINPYMSSPCHIEMILTEKEQIVPK 159
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 78.2 bits (184), Expect = 2e-14
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = +2
Query: 290 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 469
PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYRAHG+INPY++S
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSA 79
Query: 470 CHIEVCLSER 499
CHIE+ L+E+
Sbjct: 80 CHIEMILTEK 89
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 31.1 bits (67), Expect = 3.4
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 373 ASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHR-SMSQRTRR 504
+S R HS S+ L +Q++ P SRSH P PH S S R+ R
Sbjct: 92 SSRRAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPHSWSHSLRSSR 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,291,108
Number of Sequences: 237096
Number of extensions: 1839592
Number of successful extensions: 3703
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3703
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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