Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_M16
         (858 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.        50   9e-08
AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.        50   9e-08
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        31   0.034
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   1.3  

>AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 50.0 bits (114), Expect = 9e-08
 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = +2

Query: 131 SGLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQ 310
           +GLT+ +  A+  +W+ V  +    G  +    F  YP   +YF         E  +N  
Sbjct: 24  TGLTKSQKVALIAAWSIVKKDLVTHGRNIFVMFFEEYPQYLDYFDFGGG-SAGELGENRS 82

Query: 311 FKAHVINLMTSLNLAVN-NLNQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVKLFID 487
             AH +N+M  +   ++  LN P ++   + KL  +HR+R + +++   +  VI++  + 
Sbjct: 83  LHAHALNVMNFIGTLIDYGLNDPALLKCSLGKLVRNHRKRNVTKEDVAAVGGVIMRYSLK 142

Query: 488 VL 493
            L
Sbjct: 143 AL 144


>AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 50.0 bits (114), Expect = 9e-08
 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = +2

Query: 131 SGLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQ 310
           +GLT+ +  A+  +W+ V  +    G  +    F  YP   +YF         E  +N  
Sbjct: 24  TGLTKSQKVALIAAWSIVKKDLVTHGRNIFVMFFEEYPQYLDYFDFGGG-SAGELGENRS 82

Query: 311 FKAHVINLMTSLNLAVN-NLNQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVKLFID 487
             AH +N+M  +   ++  LN P ++   + KL  +HR+R + +++   +  VI++  + 
Sbjct: 83  LHAHALNVMNFIGTLIDYGLNDPALLKCSLGKLVRNHRKRNVTKEDVAAVGGVIMRYSLK 142

Query: 488 VL 493
            L
Sbjct: 143 AL 144


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 31.5 bits (68), Expect = 0.034
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 3/136 (2%)
 Frame = +2

Query: 131 SGLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQ 310
           +GLT  E   +  +W  +  +    G  +L  LF+ +P    YF        +    N  
Sbjct: 4   TGLTASEKITLFSAWGLIRKDLDVHGRNVLLLLFHKHPRYIAYFDFTDDPNAQSLVDNKS 63

Query: 311 FKAHVINLMTSLNLAVN-NLNQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVKLFID 487
                I++  ++   +      P +  A + K+   H+ R +  ++   + EV++     
Sbjct: 64  LYDQAIHVFKAVGALIEYGFKDPVLFDATLRKITRRHKDRPVYTEDILTIGEVLLNYLEQ 123

Query: 488 VL--RLDDATLSAWGK 529
            L  ++ D+   A+ K
Sbjct: 124 ALGRQMSDSLPDAFWK 139


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
 Frame = -3

Query: 613  YIVCMYLLSCLFRAIQCDKY-MLVPEFDSLPPR*QCGVVQT*YIYEQFHYNFF*LMKI-- 443
            Y++C +L+  LF A+  D +  L  ++  L P      V+    Y+         + +  
Sbjct: 1409 YVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFVRLWSEYDPDAKGRIKHLDVVT 1468

Query: 442  LLLDLSPPVRFTKFSHHRSNYLRLIQI 362
            LL  +SPP+ F K   HR    RL+ +
Sbjct: 1469 LLRKISPPLGFGKLCPHRVACKRLVSM 1495


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 902,199
Number of Sequences: 2352
Number of extensions: 18429
Number of successful extensions: 57
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)