Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_M15
         (511 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0790 - 21214282-21214369,21214455-21214564,21215478-212155...   124   3e-29
08_01_0372 + 3286861-3286939,3287220-3287299,3289041-3289150,328...   124   3e-29
09_04_0106 - 14636773-14636863,14636948-14637057,14638107-146381...   123   7e-29
08_02_1022 + 23707993-23708528,23708620-23708706,23708807-237088...    28   5.0  

>08_02_0790 -
           21214282-21214369,21214455-21214564,21215478-21215557,
           21215659-21215737
          Length = 118

 Score =  124 bits (300), Expect = 3e-29
 Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
 Frame = +1

Query: 34  MVQRLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPRCGQCKSKLRGIQPARPA 213
           MVQRLT+R+R SY TKSNQ   V+TPGGRLVYQY KK    P+C     K++GI   RPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60

Query: 214 E--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 339
           E  RSRL   ++TV R YGGVL    V++RI+RAFL+EEQKIVK
Sbjct: 61  EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEEQKIVK 104


>08_01_0372 +
           3286861-3286939,3287220-3287299,3289041-3289150,
           3289224-3289311
          Length = 118

 Score =  124 bits (300), Expect = 3e-29
 Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
 Frame = +1

Query: 34  MVQRLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPRCGQCKSKLRGIQPARPA 213
           MVQRLT+R+R SY TKSNQ   V+TPGGRLVYQY KK    P+C     K++GI   RPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60

Query: 214 E--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 339
           E  RSRL   ++TV R YGGVL    V++RI+RAFL+EEQKIVK
Sbjct: 61  EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEEQKIVK 104


>09_04_0106 -
           14636773-14636863,14636948-14637057,14638107-14638186,
           14638302-14638380
          Length = 119

 Score =  123 bits (297), Expect = 7e-29
 Identities = 62/104 (59%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
 Frame = +1

Query: 34  MVQRLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPRCGQCKSKLRGIQPARPA 213
           MVQRLT+R+R SY TKSNQ   V+TPGG+LVYQY KK    P+C     K++GI   RPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60

Query: 214 E--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 339
           E  RSRL   ++TV R YGGVL    V++RI+RAFL+EEQKIVK
Sbjct: 61  EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEEQKIVK 104


>08_02_1022 +
           23707993-23708528,23708620-23708706,23708807-23708863,
           23708955-23709261,23709545-23709631,23709720-23709767
          Length = 373

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 222 GTFSRSSWLDTTEFALALTTPWXLLGLFYILINQAA 115
           G + + SWL    FA+ALT  + L+    +LI Q A
Sbjct: 22  GVYLQRSWLVLLMFAVALTPTYVLMEDLLLLIGQPA 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,182,616
Number of Sequences: 37544
Number of extensions: 196897
Number of successful extensions: 418
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)