Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_M15
(511 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34 pro... 129 6e-30
CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein. 124 1e-28
CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein. 124 1e-28
BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34 p... 124 1e-28
BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34 p... 124 1e-28
BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34 p... 124 1e-28
AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34 p... 124 1e-28
AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34 p... 55 2e-07
BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein. 30 4.1
BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein. 30 4.1
AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein. 30 4.1
AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein. 30 4.1
>L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 129 bits (311), Expect = 6e-30
Identities = 66/107 (61%), Positives = 74/107 (69%), Gaps = 3/107 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ RTPG R+VY Y KK P+ CG C KLRG++P R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGKLRGVRPVR 60
Query: 208 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQK-IVKVL 345
P RL KK V R YGG +C KCV+ RI RAFLIEEQK IVKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIIVKVL 107
>CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 124 bits (300), Expect = 1e-28
Identities = 64/107 (59%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ RTPG R+VY Y KK P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 345
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 124 bits (300), Expect = 1e-28
Identities = 64/107 (59%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ RTPG R+VY Y KK P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 345
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 124 bits (300), Expect = 1e-28
Identities = 64/107 (59%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ RTPG R+VY Y KK P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 345
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 124 bits (300), Expect = 1e-28
Identities = 64/107 (59%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ RTPG R+VY Y KK P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 345
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 124 bits (300), Expect = 1e-28
Identities = 64/107 (59%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ RTPG R+VY Y KK P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 345
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 124 bits (300), Expect = 1e-28
Identities = 64/107 (59%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ RTPG R+VY Y KK P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 345
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34
protein.
Length = 45
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +1
Query: 43 RLTFRRRLSYNTKSNQXXXVRTPGGRLVYQYVKKPKXXPR--CG 168
RLT+RRRLSYNT SN+ RTPG R+VY Y KK P+ CG
Sbjct: 1 RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACG 44
>BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein.
Length = 349
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 389 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 261
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein.
Length = 580
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 389 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 261
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein.
Length = 349
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 389 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 261
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein.
Length = 722
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 389 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 261
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,518,748
Number of Sequences: 237096
Number of extensions: 1152280
Number of successful extensions: 6492
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6485
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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