Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_M12
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 427 CHVGGSPCPR 398
           CHV G P PR
Sbjct: 423 CHVAGEPLPR 432


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 5    RPIAFQIYSKISSEWQT 55
            RP++  IYS I S++ T
Sbjct: 1328 RPLSEHIYSSIDSDYST 1344


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -2

Query: 359 GIGVLFLALY 330
           GI VLFLALY
Sbjct: 10  GIAVLFLALY 19


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 372 WQKNQAACYLGQGDPPTWQ 428
           + K + AC +  G P  WQ
Sbjct: 338 YAKGKDACQMDSGGPVLWQ 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,570
Number of Sequences: 438
Number of extensions: 3095
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)