Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_M11
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    25   2.2  
AY787484-1|AAV87217.1|   70|Anopheles gambiae GABA receptor subu...    23   5.0  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   6.7  

>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 43  LKNHTSYLFSCLTNCKNNSSTPKWH*HFKEEQMYDYLQKS 162
           +KN   Y F+ L+  +   S+  W   F EE +   + KS
Sbjct: 73  VKNGDEYTFNTLSPSRTRRSSSSWAMEFDEETVDGRMVKS 112


>AY787484-1|AAV87217.1|   70|Anopheles gambiae GABA receptor subunit
           protein.
          Length = 70

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 259 TLICLIAPYLPKISYISSADIL*G 188
           TL+      LPKISY+ S D+  G
Sbjct: 43  TLMSSTNAALPKISYVKSIDVYLG 66


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +1

Query: 325 MPVTIYLVLMFVTGI 369
           +P+TI  +L+F+TG+
Sbjct: 46  IPITIIYLLIFITGV 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,514
Number of Sequences: 2352
Number of extensions: 11890
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)