Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_M07
         (835 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.74 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.98 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   1.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    24   1.3  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.1  

>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -2

Query: 777 IIMSVALLIPSSKDSLHPYKLSNLLFVTESLTLIAGTFKSPSRNILYKLCTPVVVSSVIP 598
           I M   L++    +SL  Y   N +F   + T     F+S    ILY +   V+  S + 
Sbjct: 17  IKMEEKLVVEKFLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILYNIILQVLFVSFVS 76

Query: 597 F 595
           +
Sbjct: 77  Y 77



 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -2

Query: 558 KFVKSPPSSKIILRGFPSGKINVCSIHQIYSSSVSPFQA*MGI 430
           ++++  P  +I  R        +C +HQ  S SV  F    G+
Sbjct: 222 QYLRLKPEGRISNRRVFISFSKICYLHQHLSKSVKLFNEVFGV 264


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = -2

Query: 771 MSVALLIPSSKDSLHPYKLSNLLFVTESLTLIAGTFKSPSRNILYKLCTPVVVSSVIPF 595
           M   L++    +SL  Y   N +F   + T     F+S    ILY +   V+  S + +
Sbjct: 1   MEEKLVVEKFLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILYNIILQVLFVSFVSY 59



 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -2

Query: 558 KFVKSPPSSKIILRGFPSGKINVCSIHQIYSSSVSPFQA*MGI 430
           ++++  P  +I  R        +C +HQ  S SV  F    G+
Sbjct: 204 QYLRLKPEGRISNRRVFISFSKICYLHQHLSKSVKLFNEVFGV 246


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = -2

Query: 741 KDSLHPYKLSNLLFVTESLTLIAGTFKSPSRNILYKLCTPVVVSSVIPFTSFKRSG--YL 568
           +D + P  + N++   ++   I   F   +R   +KL T  +    +    +K SG  Y 
Sbjct: 175 QDEVKPRGVLNIIPKQDNFRAIVSIFPDSARKPFFKLLTSKIYK--VLEEKYKTSGSLYT 232

Query: 567 VWTKFVK 547
            W++F +
Sbjct: 233 CWSEFTQ 239


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -1

Query: 142 VQSLIYLR*IHLLFSFEVIFIKIPEI 65
           VQ+L  +R  ++LFS E + I+IP++
Sbjct: 177 VQTLAAIRINNILFSAEGVEIRIPDV 202


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 437 IYAWKGETDDEYIWCIEQ 490
           ++ W  ETDD + +C E+
Sbjct: 347 VFIWSIETDDMHEFCGEK 364


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,922
Number of Sequences: 336
Number of extensions: 4570
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)