Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_M06
         (754 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Q4T1 Cluster: Putative uncharacterized protein; n=2; ...    36   1.4  
UniRef50_Q4N6J4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.5  
UniRef50_A7RJY9 Cluster: Predicted protein; n=1; Nematostella ve...    34   3.3  
UniRef50_A7PBD6 Cluster: Chromosome chr16 scaffold_10, whole gen...    34   4.3  
UniRef50_Q6M9M2 Cluster: Putative uncharacterized protein; n=1; ...    33   10.0 

>UniRef50_Q4Q4T1 Cluster: Putative uncharacterized protein; n=2;
            Leishmania|Rep: Putative uncharacterized protein -
            Leishmania major
          Length = 2781

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 24/68 (35%), Positives = 36/68 (52%)
 Frame = -3

Query: 350  LCKVCFQSLI*SALPPAG*YPSSCS*SLRMATPTRVAVFFLLCLRRSCTASRCRTKRGKS 171
            +C+    +LI  AL PA    S C  +  + TP  +AV  L+ L+R   A R R +RG+S
Sbjct: 1160 MCRTSLLALI--ALSPAC---SRCLDTFLLETPADIAVLRLVGLQRELAALRARQRRGQS 1214

Query: 170  RTSVNNIL 147
            R+    +L
Sbjct: 1215 RSGSTPLL 1222


>UniRef50_Q4N6J4 Cluster: Putative uncharacterized protein; n=1;
            Theileria parva|Rep: Putative uncharacterized protein -
            Theileria parva
          Length = 1417

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -2

Query: 732  TFLFSTKNINVFRHRCFTIDLYRTSIVSN 646
            + L S   + V  HRCF +DLY T++VSN
Sbjct: 1307 SLLASALILKVLSHRCFKVDLYSTTVVSN 1335


>UniRef50_A7RJY9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 237

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -2

Query: 693 HRCFTIDLYR-TSIVSNRC*H*CQHRCFSNVEH 598
           HRC +   +R TS V +RC   C+HRC S+V+H
Sbjct: 2   HRCTSSVKHRCTSRVKHRCTSSCEHRCTSSVKH 34


>UniRef50_A7PBD6 Cluster: Chromosome chr16 scaffold_10, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr16 scaffold_10, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 864

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +2

Query: 215 DEDTTKRKLRLWSVLPYEVIKNKMKGINQLEEEQIKSETESKPYIISE 358
           D D T  K  L +VLP++++ ++ K IN L      S+T+ KP ++ +
Sbjct: 358 DADVTSMKDLLEAVLPFDILLDRRKRINFLNNLGKCSKTQKKPQVVRD 405


>UniRef50_Q6M9M2 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Protochlamydia amoebophila UWE25|Rep:
           Putative uncharacterized protein - Protochlamydia
           amoebophila (strain UWE25)
          Length = 187

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 400 NSTKFECNLLKSNKNSRVLKLYSETKMIFENFGHSNMYYCDNE 528
           N+T  E ++ + +KNS ++K++     + E FG   +  CDN+
Sbjct: 94  NTTWIELSVKRGDKNSPIMKVHYAALEVLEQFGLKPLNACDND 136


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,771,062
Number of Sequences: 1657284
Number of extensions: 10953853
Number of successful extensions: 29176
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29140
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)