Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_M06
         (754 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0295 + 22099791-22100030,22100681-22100797,22100886-22102616     31   1.3  
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437...    28   6.9  
05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042     28   9.2  
03_05_0820 + 27951971-27954236,27954746-27955008,27955169-279552...    28   9.2  
01_06_0930 + 33134385-33138257                                         28   9.2  

>09_06_0295 + 22099791-22100030,22100681-22100797,22100886-22102616
          Length = 695

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +1

Query: 415 ECNLLKSNKNSRVLKLYSETKMIFENFGHSNMYYCDNERYVELSVDERAYSNVCA 579
           EC   + ++N+R  + ++ T M+F   G+SN  Y  +  ++  + D R+ SN  A
Sbjct: 366 ECFTEEDSENARQKQSFNHTDMVFSGLGNSNRAYMPD--HLNKNPDIRSESNTIA 418


>01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,
            4378900-4378970,4379038-4379144,4379241-4379711,
            4379791-4379976,4380132-4380425,4380820-4381434,
            4382219-4382615,4382768-4382850,4383397-4383567,
            4384046-4384243,4384754-4385314,4385401-4385460,
            4385553-4385869,4385980-4386403,4386539-4387006,
            4387093-4387209,4387306-4387427,4387506-4388247,
            4388453-4388485,4388625-4388879,4388975-4389160,
            4390115-4390453,4391293-4392045
          Length = 3017

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +1

Query: 394  LINSTKFECNLLKSNKNSRVLKLYSETKMIFENFGHSNMYYCDNERYVELSVDERAYSNV 573
            L     F   LL +  +S  L  +S T  I+   G+S       E  ++ SV+E  YS++
Sbjct: 1433 LFEQGPFGMQLLSNAPSSEELFTHSVTDYIYNTAGYSEANALSLEASIQKSVEEELYSSL 1492


>05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042
          Length = 1211

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +2

Query: 38   DERLNFVVATQAGLTVSR*SAIRAYTANSCAVMLQIIIYCL--LMFLTCLALFDIVRLCM 211
            ++R+  + A + GL +   S +   +  SC +    +  CL  L  L CL+L  I+ L  
Sbjct: 924  EQRMRLIYARRIGLPLVPPSGLSDLSLKSCTITDTALSICLGGLASLRCLSLSKIMSLTT 983

Query: 212  NDEDTTKRKL 241
               +   +KL
Sbjct: 984  LPSEEVLKKL 993


>03_05_0820 +
           27951971-27954236,27954746-27955008,27955169-27955288,
           27957790-27957856,27958310-27958515
          Length = 973

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 137 LQIIIYCLLMFLTCLALFDIVRLCMN-DEDTTKR 235
           +Q+ IYC++  LTCL    +  L  N +ED  KR
Sbjct: 762 IQLCIYCIVTILTCLLNLVLPPLIWNSNEDYCKR 795


>01_06_0930 + 33134385-33138257
          Length = 1290

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +2

Query: 11   MIRIXNIIKDERLNFVVATQAGLTVSR*SAIRAYTANSCAVMLQIIIYCL--LMFLTCLA 184
            +I++     +ER+ F+ + +AGL +   S +   + +SC++    +  CL  L  L  L 
Sbjct: 948  IIKVWLCCHEERMRFIYSRKAGLPLVLPSGLCVLSLSSCSITDGALAICLGGLTSLRNLF 1007

Query: 185  LFDIVRL 205
            L +I+ L
Sbjct: 1008 LTEIMTL 1014


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,055,939
Number of Sequences: 37544
Number of extensions: 287863
Number of successful extensions: 677
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)