Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_M06
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82284-6|CAE17979.1|  342|Caenorhabditis elegans Hypothetical pr...    31   0.66 
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z81131-3|CAB03424.1|  438|Caenorhabditis elegans Hypothetical pr...    28   8.2  
U00051-14|AAM29692.1|  469|Caenorhabditis elegans Hypothetical p...    28   8.2  
U00051-13|AAA91358.1|  491|Caenorhabditis elegans Hypothetical p...    28   8.2  

>Z82284-6|CAE17979.1|  342|Caenorhabditis elegans Hypothetical
           protein T27E7.9 protein.
          Length = 342

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 10/37 (27%), Positives = 24/37 (64%)
 Frame = +2

Query: 125 CAVMLQIIIYCLLMFLTCLALFDIVRLCMNDEDTTKR 235
           C ++   ++Y L+ +++  +LFD++ + MN E+ + R
Sbjct: 172 CCILRDFVLYPLIWYMSINSLFDLIFVSMNTEEVSVR 208


>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
           protein Y41E3.9 protein.
          Length = 1440

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
 Frame = +2

Query: 134 MLQIIIYCLLMFLTCL--ALFDIVRLCMNDEDTTKRKLRLWSVLPYEVIKNKMKGINQLE 307
           ++ ++I C   F TC   AL  + R C    D   R++ +       + K    G+ + +
Sbjct: 470 IIDLVISCK-KFATCHLPALIHVARHCFWSSDGNVRQMGV------SMWKQLFVGMEKRD 522

Query: 308 EEQIKSETESKPYIISETV**NYIKFFIH*LIAQNSNVICSRAIKIQEC*NYIPKL 475
            E++ +E   K +  SET     +  F   + + NS+VI   + +IQ+C   I KL
Sbjct: 523 REKVFTEL-MKHFSQSETECEAVLDVFFKVIKSTNSSVIQEFSTQIQKCIELIHKL 577


>Z81131-3|CAB03424.1|  438|Caenorhabditis elegans Hypothetical
           protein T24D1.4 protein.
          Length = 438

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -2

Query: 585 YSCTHIRVCSLVYAQLHITFIVAIIHITMTKIF 487
           +SC H+ + ++VY  +   ++  I HIT T+ +
Sbjct: 28  FSCIHVLLTTIVYHYVPEPYMDEIFHITQTRSY 60


>U00051-14|AAM29692.1|  469|Caenorhabditis elegans Hypothetical
           protein F42G9.1b protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 460 LYSETKMIFENFGHSNMYYCDNERYVELSVDERAYSNV 573
           L  + K+I  N G S    C N + V+LSVD +    V
Sbjct: 301 LVGKDKVIVANAGDSRAVLCRNGKAVDLSVDHKPEDEV 338


>U00051-13|AAA91358.1|  491|Caenorhabditis elegans Hypothetical
           protein F42G9.1a protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 460 LYSETKMIFENFGHSNMYYCDNERYVELSVDERAYSNV 573
           L  + K+I  N G S    C N + V+LSVD +    V
Sbjct: 323 LVGKDKVIVANAGDSRAVLCRNGKAVDLSVDHKPEDEV 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,929,902
Number of Sequences: 27780
Number of extensions: 292553
Number of successful extensions: 809
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)