Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_L23
         (847 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p pro...   204   9e-53
AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB...   204   9e-53
AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA...   204   9e-53

>AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p
           protein.
          Length = 522

 Score =  204 bits (499), Expect = 9e-53
 Identities = 95/143 (66%), Positives = 118/143 (82%)
 Frame = +3

Query: 417 TLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSV 596
           T +  PHI R +   Q++  +IL VIG TPLVKL+ +P  +G++CEMYAKCEFLNPGGSV
Sbjct: 28  TAEKSPHIHRGIAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSV 87

Query: 597 KDRIAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEK 776
           KDRI YRM  DAE++G+LKPG + I+EPTSGNTGIGLA+A AV+GY+CIIV+PEKMS+EK
Sbjct: 88  KDRIGYRMVQDAEEQGLLKPGYT-IIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEK 146

Query: 777 VNTLVAXGAEIIRTPTEAAWDSP 845
           V+ L   GA+IIRTPTEAA+DSP
Sbjct: 147 VSALRTLGAKIIRTPTEAAYDSP 169


>AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB,
           isoform B protein.
          Length = 522

 Score =  204 bits (499), Expect = 9e-53
 Identities = 95/143 (66%), Positives = 118/143 (82%)
 Frame = +3

Query: 417 TLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSV 596
           T +  PHI R +   Q++  +IL VIG TPLVKL+ +P  +G++CEMYAKCEFLNPGGSV
Sbjct: 28  TAEKSPHIHRGIAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSV 87

Query: 597 KDRIAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEK 776
           KDRI YRM  DAE++G+LKPG + I+EPTSGNTGIGLA+A AV+GY+CIIV+PEKMS+EK
Sbjct: 88  KDRIGYRMVQDAEEQGLLKPGYT-IIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEK 146

Query: 777 VNTLVAXGAEIIRTPTEAAWDSP 845
           V+ L   GA+IIRTPTEAA+DSP
Sbjct: 147 VSALRTLGAKIIRTPTEAAYDSP 169


>AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA,
           isoform A protein.
          Length = 522

 Score =  204 bits (499), Expect = 9e-53
 Identities = 95/143 (66%), Positives = 118/143 (82%)
 Frame = +3

Query: 417 TLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSV 596
           T +  PHI R +   Q++  +IL VIG TPLVKL+ +P  +G++CEMYAKCEFLNPGGSV
Sbjct: 28  TAEKSPHIHRGIAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSV 87

Query: 597 KDRIAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEK 776
           KDRI YRM  DAE++G+LKPG + I+EPTSGNTGIGLA+A AV+GY+CIIV+PEKMS+EK
Sbjct: 88  KDRIGYRMVQDAEEQGLLKPGYT-IIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEK 146

Query: 777 VNTLVAXGAEIIRTPTEAAWDSP 845
           V+ L   GA+IIRTPTEAA+DSP
Sbjct: 147 VSALRTLGAKIIRTPTEAAYDSP 169


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,186,784
Number of Sequences: 53049
Number of extensions: 801026
Number of successful extensions: 1737
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)