Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_L21
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   3.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   4.2  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   4.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   4.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   9.6  

>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -3

Query: 583 IDLETAKPPVKPSLLVQAGDRHRSILECVSKRTRCLYFQNELRQ 452
           IDL    P V+  +L    +RH+    C  +    ++F   LR+
Sbjct: 190 IDLREYYPSVEWDILGVPAERHKKYYPCCDEPYPDIFFNITLRR 233


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 607 PASVRATYGPFSTKQTVPAR 666
           PA+V     P STK+T P +
Sbjct: 774 PANVNKEQSPNSTKETTPKK 793


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +1

Query: 616 VRATYG-PFSTKQTVPARYAVPDPLEP 693
           V   YG PF+     P R+  P P+EP
Sbjct: 59  VHVFYGIPFAKPPIGPLRFRKPLPIEP 85


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +1

Query: 616 VRATYG-PFSTKQTVPARYAVPDPLEP 693
           V   YG PF+     P R+  P P+EP
Sbjct: 59  VHVFYGIPFAKPPIGPLRFRKPLPIEP 85


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 478 DSGFFLKHTPRWNGAGPPPEPIGTALP 558
           +SG  +       G GPP E  G+ LP
Sbjct: 6   ESGGTMTEDYDMTGCGPPEEETGSNLP 32


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 478 DSGFFLKHTPRWNGAGPPPEPIGTALP 558
           +SG  +       G GPP E  G+ LP
Sbjct: 6   ESGGTMTEDYDMTGCGPPEEETGSNLP 32


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 478 DSGFFLKHTPRWNGAGPPPEPIGTALP 558
           +SG  +       G GPP E  G+ LP
Sbjct: 6   ESGGTMTEDYDMTGCGPPEEETGSNLP 32


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 43  RDPLN*LEPCVMFSSQRVTFV*VSSATFIC 132
           R+  N ++ C MF S  + F  V + T IC
Sbjct: 408 RNGENPIDTCEMFDSVSILFSDVVTFTEIC 437


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 629 YVARTEAGAEPCKIVNRSRDSKAPGKAVPIGSGGGPA 519
           +VA +    EPC+ V+ SR        + +G G   A
Sbjct: 45  FVATSPVIGEPCQRVHSSRIPDLSYDFIVVGGGAARA 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,873
Number of Sequences: 438
Number of extensions: 4971
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)