Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_L19
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   2.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.6  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   8.2  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +2

Query: 95  NISNSEFIKNRDGAITYQSVGEVNPLVAITRNEIIGNCLKLYGNFTTCQSVVRVDVQNTQ 274
           N++ +E++    G   Y S+  V PL  I     +     ++GN TTC  +++     T 
Sbjct: 19  NLTEAEYLAKVLGP-KYLSMRMVIPLTIIYMIIFVTG---IFGNITTCTVIIKNPAMQTA 74

Query: 275 T 277
           T
Sbjct: 75  T 75


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 258 TYRIRKRWCLGIIWCEI 308
           T+ + K W  G +WC I
Sbjct: 124 TWEVFKVWIFGDLWCSI 140


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 194 IIGNCLKLYGNFTTCQSVVRVDVQNTQTLVFRNNL-VRDNVGGLLV 328
           +I  CL L+GN     +VVR     T T  F  +L V D +  +LV
Sbjct: 194 VIVPCLTLFGNVLVILAVVRERALQTVTNYFIVSLAVADLLVAVLV 239


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 141 VIAPSLFFMNSLFDMLCWTSRLNPIA 64
           VI P    M+ L  ++C  +RLN +A
Sbjct: 52  VINPFFCDMSPLLSLVCADTRLNKLA 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,935
Number of Sequences: 438
Number of extensions: 5282
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)