Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_L15
         (824 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy c...    30   8.8  
AK026756-1|BAB15543.1|  394|Homo sapiens protein ( Homo sapiens ...    30   8.8  
AB046823-1|BAB13429.2| 1659|Homo sapiens KIAA1603 protein protein.     30   8.8  

>AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy chain
            DNAH5 protein.
          Length = 4624

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 158  QFKGVHGGNPDLRESIAGRAREQSSAEVPGDFVPIHARRR 277
            Q K   GG  + RE++  R  +    ++P D+VP   + R
Sbjct: 4340 QPKDTSGGGDETREAVVARLADDMLEKLPPDYVPFEVKER 4379


>AK026756-1|BAB15543.1|  394|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23103 fis, clone LNG07621. ).
          Length = 394

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 158 QFKGVHGGNPDLRESIAGRAREQSSAEVPGDFVPIHARRR 277
           Q K   GG  + RE++  R  +    ++P D+VP   + R
Sbjct: 110 QPKDTSGGGDETREAVVARLADDMLEKLPPDYVPFEVKER 149


>AB046823-1|BAB13429.2| 1659|Homo sapiens KIAA1603 protein protein.
          Length = 1659

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 158  QFKGVHGGNPDLRESIAGRAREQSSAEVPGDFVPIHARRR 277
            Q K   GG  + RE++  R  +    ++P D+VP   + R
Sbjct: 1375 QPKDTSGGGDETREAVVARLADDMLEKLPPDYVPFEVKER 1414


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,164,333
Number of Sequences: 237096
Number of extensions: 2203587
Number of successful extensions: 4073
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4073
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)