Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_L15
         (824 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77668-3|CAI46576.1|  284|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z77655-9|CAI46567.1|  284|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z81056-10|CAB02904.2|  301|Caenorhabditis elegans Hypothetical p...    29   5.3  
AL024499-5|CAC42318.1|  562|Caenorhabditis elegans Hypothetical ...    28   9.3  
AL024499-4|CAC42317.1|  617|Caenorhabditis elegans Hypothetical ...    28   9.3  
AL024499-3|CAA19707.1|  618|Caenorhabditis elegans Hypothetical ...    28   9.3  
AF031840-1|AAC13676.1|  562|Caenorhabditis elegans GLY6c protein.      28   9.3  
AF031839-1|AAC13675.1|  617|Caenorhabditis elegans GLY6b protein.      28   9.3  
AF031838-1|AAC13674.1|  618|Caenorhabditis elegans GLY6a protein.      28   9.3  

>Z77668-3|CAI46576.1|  284|Caenorhabditis elegans Hypothetical
           protein R11G10.3 protein.
          Length = 284

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 415 FLRNYTTFYFYKLTVLAILKGILLEYNYYS 504
           F RN   F+F    + +IL+ IL+  NYY+
Sbjct: 71  FFRNLLEFFFINQLLFSILEFILISANYYT 100


>Z77655-9|CAI46567.1|  284|Caenorhabditis elegans Hypothetical
           protein R11G10.3 protein.
          Length = 284

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 415 FLRNYTTFYFYKLTVLAILKGILLEYNYYS 504
           F RN   F+F    + +IL+ IL+  NYY+
Sbjct: 71  FFRNLLEFFFINQLLFSILEFILISANYYT 100


>Z81056-10|CAB02904.2|  301|Caenorhabditis elegans Hypothetical
           protein F09F3.4 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = +2

Query: 659 FRKCCFIRVFNNQLFPIS--HWRIIILFFLIEGN 754
           F+K CF++ F+N +  ++   W + +  FLIE N
Sbjct: 39  FQKLCFVKAFSNAVISLTIIVWAVPLSAFLIETN 72


>AL024499-5|CAC42318.1|  562|Caenorhabditis elegans Hypothetical
           protein H38K22.5c protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 308 TYSLN*FNVLVFDGRVWERSLLELRR 231
           T+++N FN+LV DG    RSL E+R+
Sbjct: 119 TFAVNQFNLLVSDGISVRRSLPEIRK 144


>AL024499-4|CAC42317.1|  617|Caenorhabditis elegans Hypothetical
           protein H38K22.5b protein.
          Length = 617

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 308 TYSLN*FNVLVFDGRVWERSLLELRR 231
           T+++N FN+LV DG    RSL E+R+
Sbjct: 119 TFAVNQFNLLVSDGISVRRSLPEIRK 144


>AL024499-3|CAA19707.1|  618|Caenorhabditis elegans Hypothetical
           protein H38K22.5a protein.
          Length = 618

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 308 TYSLN*FNVLVFDGRVWERSLLELRR 231
           T+++N FN+LV DG    RSL E+R+
Sbjct: 119 TFAVNQFNLLVSDGISVRRSLPEIRK 144


>AF031840-1|AAC13676.1|  562|Caenorhabditis elegans GLY6c protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 308 TYSLN*FNVLVFDGRVWERSLLELRR 231
           T+++N FN+LV DG    RSL E+R+
Sbjct: 119 TFAVNQFNLLVSDGISVRRSLPEIRK 144


>AF031839-1|AAC13675.1|  617|Caenorhabditis elegans GLY6b protein.
          Length = 617

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 308 TYSLN*FNVLVFDGRVWERSLLELRR 231
           T+++N FN+LV DG    RSL E+R+
Sbjct: 119 TFAVNQFNLLVSDGISVRRSLPEIRK 144


>AF031838-1|AAC13674.1|  618|Caenorhabditis elegans GLY6a protein.
          Length = 618

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 308 TYSLN*FNVLVFDGRVWERSLLELRR 231
           T+++N FN+LV DG    RSL E+R+
Sbjct: 119 TFAVNQFNLLVSDGISVRRSLPEIRK 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,980,326
Number of Sequences: 27780
Number of extensions: 378754
Number of successful extensions: 903
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)