Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_L14
(804 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr ... 39 7e-04
SPAC1705.03c ||SPAC23H4.19|conserved fungal family|Schizosacchar... 34 0.021
SPBC1198.02 |dea2||adenine deaminase Dea2|Schizosaccharomyces po... 30 0.33
SPAC3A12.12 |atp11||F1-ATPase chaperone Atp11 |Schizosaccharomyc... 27 2.4
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 27 3.1
SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr... 27 4.1
SPBC14F5.13c |||alkaline phosphatase |Schizosaccharomyces pombe|... 26 5.5
SPAC144.15c |cog1||Golgi transport complex subunit Cog1 |Schizos... 26 7.2
>SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 339
Score = 39.1 bits (87), Expect = 7e-04
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 5/234 (2%)
Frame = +1
Query: 82 DLNFFCKXLPKXALHAHLNGSLSQATMLQLQRYYVDAGISDKTNTFLDEFQIGAGDTRNL 261
D+ F + LPK LH HL G+L L+L I K ++ ++E + + + +L
Sbjct: 3 DIERFIEKLPKAELHLHLEGTLEAELKLKLSHRNK---IPLKQSS-IEEIK-ESYNFHDL 57
Query: 262 SECFQVFNIAHSLTSTSEALVMATELTLQEFQEDGCCYIELRSTPR--DTQYITKKQYID 435
+ +V+ L + L++ Y E+ P+ + I+ + I
Sbjct: 58 ASFLEVYYEGVELLLHEQDFYDLCYQYLRKAASQNVVYAEMFFDPQLHTRRGISFETVIK 117
Query: 436 SIIRAMEKPXXXXXXXXXXXXXXXRASQLQEVEEIADIAIERHKIHPDTVVGIELSGNPA 615
+IRA + R + EE + ++ + ++GI L N
Sbjct: 118 GLIRARDDAMRDFHIYSQLIMCFIREMSFENAEETLNASLP----YKSEIIGIGLDSNEE 173
Query: 616 VGNFGDFIPALNRARQSGLKVTLHCG--EVCNPEEVLEML-NFKPERIGHGVCI 768
F+ RARQ G ++T HC + + + L + ERI HG+ I
Sbjct: 174 NNPPIKFLKVFQRARQLGYRLTCHCDLHQKNTTTHIRQALEDIGVERIDHGINI 227
>SPAC1705.03c ||SPAC23H4.19|conserved fungal
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 34.3 bits (75), Expect = 0.021
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 139 GSLSQATMLQLQRYYVDAGISDKTNTFLDEFQIGAGDTRNLSE--CFQVFNIAHSLTSTS 312
GSL+ A + LQ +AG+SD + +D+ Q+ A D +L FQV N + T
Sbjct: 117 GSLNLAVLPNLQELQFNAGLSDSDSVVIDDTQLQAIDGISLDSVTTFQVTNNRYIQEITM 176
Query: 313 EALVMATELTL 345
E L A + +
Sbjct: 177 EGLESAQNIQI 187
>SPBC1198.02 |dea2||adenine deaminase Dea2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 367
Score = 30.3 bits (65), Expect = 0.33
Identities = 48/228 (21%), Positives = 80/228 (35%), Gaps = 5/228 (2%)
Frame = +1
Query: 94 FCKXLPKXALHAHLNGSLSQATMLQL-QRYYVDAGISDKTNTFLDEFQIGAGDTRNLSEC 270
F + LPK H HL G LS + +L ++ + D T L +
Sbjct: 9 FIRKLPKCEHHVHLEGCLSPDLVFRLAKKNGITLPSDDAAYTTPSTLLASYEHFGCLDDF 68
Query: 271 FQVFNIAHS-LTSTSEALVMATELTLQEFQEDGCCYIELRSTPR--DTQYITKKQYIDSI 441
+ + IA S L S+ +A E G + E+ P+ ++ I+ +
Sbjct: 69 LRYYYIAVSVLIEASDFEALAYEY-FSIAHSQGVHHAEVFFDPQTHTSRGISYDVVVSGF 127
Query: 442 IRAMEKPXXXXXXXXXXXXXXXRASQLQEVEEIADIAIERHKIHPDTVVGIELSGNPAVG 621
A E+ R + E A++R+ V G+ L +
Sbjct: 128 SAACERANRDFGMSTNLIMCFLRHLPSEAAHETFAEALKRNDFENGIVAGVGLDSSEVDF 187
Query: 622 NFGDFIPALNRARQSGLKVTLHCGEVCNPEEVLEML-NFKPERIGHGV 762
F A + G++ T H GE +P + L N +RI HG+
Sbjct: 188 PPELFQEVYKLAAEKGIRRTGHAGEEGDPSYIRSGLDNLSLQRIDHGI 235
>SPAC3A12.12 |atp11||F1-ATPase chaperone Atp11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 158 LCFSFKGIMSTLAYLIKQTHFSTN 229
LC SFK I T AY ++ H ++N
Sbjct: 13 LCHSFKSIPRTSAYAVRFAHHTSN 36
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/50 (22%), Positives = 28/50 (56%)
Frame = +1
Query: 310 SEALVMATELTLQEFQEDGCCYIELRSTPRDTQYITKKQYIDSIIRAMEK 459
SE + E +L+ F+E+G YI++ Y+ K++ +++++ ++
Sbjct: 141 SECHLRCAERSLKVFEENGGIYIKIGQHLSAMGYVIPKEWTNTMVKLQDR 190
>SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 808
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 277 VFNIAHSLTSTSEALVMATELTLQEFQEDGCCYIELRSTPRDTQ 408
VFN A S + E + A + LQEF+E L++ P DT+
Sbjct: 288 VFNYASSKKISEEMISQAIDKNLQEFEEKFQATFPLKA-PYDTE 330
>SPBC14F5.13c |||alkaline phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 532
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 130 HLNGSLSQATMLQLQRYYVDAGISDKTNTFLDEFQIGAGDTRNLSE 267
HL G++ + Q Y++ +SD T D GA D +L E
Sbjct: 472 HLRGNMENIEIGQFMEIYLNVSLSDVTEKLKDAPIHGAPDRPSLVE 517
>SPAC144.15c |cog1||Golgi transport complex subunit Cog1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 701
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +1
Query: 31 SFFEKWKASFNXVFLVMDLNFFCKXLPKXALHAHLNGSLSQATMLQLQRYY 183
+ ++WK SF + +FF L+ L G LS+ + Q + +Y
Sbjct: 295 NILQQWKLSFFSKISHSEKSFFSNATSLTTLYQILEGLLSELSEPQFKEFY 345
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,263,571
Number of Sequences: 5004
Number of extensions: 67095
Number of successful extensions: 187
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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