Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_L11
         (890 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.   150   2e-38
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    23   4.9  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    23   4.9  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    23   4.9  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    23   4.9  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    23   4.9  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    23   4.9  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    23   4.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.9  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    22   6.5  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   8.6  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score =  150 bits (363), Expect = 2e-38
 Identities = 86/235 (36%), Positives = 126/235 (53%), Gaps = 1/235 (0%)
 Frame = +1

Query: 187 IGEPLYPAHANVPADSSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSP 366
           IGEP    H++   D SYDFI+VGGG+A  V+A RL+EV+NW VL++EAG D P+ A  P
Sbjct: 52  IGEPCQRVHSSRIPDLSYDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDEPAGAEIP 111

Query: 367 GYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYD 546
               +      +W Y+  N+  +       S    RGK LGG++  + M Y RG+R DY+
Sbjct: 112 SNLQLYLGGDLDWKYYTTNESHACLSTG-GSCYWPRGKNLGGTTLHHGMAYHRGHRKDYE 170

Query: 547 NWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESADLHGNKGYLGVTR-PLWKSFDEGL 723
            W + G  GW W+ V+ Y+ KSE   +N  +S      H + G + V R P    F   +
Sbjct: 171 RWVQQGAFGWSWDEVMPYYLKSE---NNTELSRVGTKYHRSGGLMNVERFPYQPPFAWKI 227

Query: 724 FDAFKEQGHEVLLDTNGQQQLGYSIPAYTIXGQKRQSTAYSFLXPIKNRPNLHLI 888
             A +E G  V  D +G +  G+++         R S+A +F+ P +NR NLH+I
Sbjct: 228 LKAAEEAGFGVSEDLSGDRINGFTVAQTISRNGVRLSSARAFITPFENRSNLHVI 282


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 662 TATKDTSESRDRCGSLSTKVFLTLSKNKVTKCYSTRMDNNN 784
           T+ + + + R+R  S   K+  +LS N     Y+   +NNN
Sbjct: 62  TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNN 102


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 662 TATKDTSESRDRCGSLSTKVFLTLSKNKVTKCYSTRMDNNN 784
           T+ + + + R+R  S   K+  +LS N     Y+   +NNN
Sbjct: 62  TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNN 102


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 662 TATKDTSESRDRCGSLSTKVFLTLSKNKVTKCYSTRMDNNN 784
           T+ + + + R+R  S   K+  +LS N     Y+   +NNN
Sbjct: 62  TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNN 102


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 662 TATKDTSESRDRCGSLSTKVFLTLSKNKVTKCYSTRMDNNN 784
           T+ + + + R+R  S   K+  +LS N     Y+   +NNN
Sbjct: 62  TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNN 102


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 662 TATKDTSESRDRCGSLSTKVFLTLSKNKVTKCYSTRMDNNN 784
           T+ + + + R+R  S   K+  +LS N     Y+   +NNN
Sbjct: 62  TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNN 102


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 662 TATKDTSESRDRCGSLSTKVFLTLSKNKVTKCYSTRMDNNN 784
           T+ + + + R+R  S   K+  +LS N     Y+   +NNN
Sbjct: 62  TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNN 102


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 662 TATKDTSESRDRCGSLSTKVFLTLSKNKVTKCYSTRMDNNN 784
           T+ + + + R+R  S   K+  +LS N     Y+   +NNN
Sbjct: 62  TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNN 102


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 497 VPSTLCFTSEGTGLITTIGPKTETKAGTGIRSFSTLRK 610
           +P+T+  T+  T   T     T T   TG+    TL++
Sbjct: 103 LPATITTTTTTTTTTTATAAATATTTATGLIKQETLQR 140


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 662 TATKDTSESRDRCGSLSTKVFLTLSKNKVTKCYSTRMDNNN 784
           T+ + + + R+R  S   K+  +LS N     Y+   +NNN
Sbjct: 62  TSKERSRDRRERERSKEPKIVSSLSNNYNYSNYNNYNNNNN 102


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 683 ESRDRCGSLSTKVFLTLSKNKVTKCYSTRMDNN 781
           + R+R  S   K+  +LS N ++   +   DNN
Sbjct: 69  DKRERERSKERKIISSLSNNYISNISNYNNDNN 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,204
Number of Sequences: 438
Number of extensions: 4526
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)