Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_L07
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       29   0.17 
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    28   0.30 
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.40 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   4.9  
AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    23   8.6  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   8.6  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.6  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = -3

Query: 491 HPARKRHTIEQSLTTCFAPIPLEGRRTLSSV---CPLPPLCSEGPSC 360
           HP ++  T+ +   TC+    LE  RTLS     CP      E P C
Sbjct: 287 HPCKRACTLGRKPETCYYRFRLEWYRTLSKACYNCPYNATDCERPHC 333


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 314 PGTRPPHRPSLFPAPICRSIAIYARVLPVLIFHV 213
           P   PP    + P P+C S   +AR+L +++  V
Sbjct: 127 PSWEPPGWQKVCPYPLCPSYRQFARILSIILIGV 160


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 0.40
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -3

Query: 368 PSCRAVSTQNGFLSLR--SWPGTRPPHRPSLFP 276
           PSCR+   +    S R  SWP +RP  +P   P
Sbjct: 269 PSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLP 301


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 190  RRTPPNQKT*KINTGKTLAYIAIDRQIGAGNREGRCGGLVPGQERRERNP 339
            RR PP+ +T ++   +   Y+ +  Q     R+G  G +  G++RR R P
Sbjct: 1114 RRLPPSPRTTEMRRRRR-NYMQL--QYRRRRRDGELGDVPQGRQRRGRIP 1160


>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 385 GGSGQTDESVRRPSRGIGAKHVVRLCSI 468
           GG     +   +   G  A HVVR+C+I
Sbjct: 81  GGRSMFQDKHSQAGPGTHAAHVVRVCAI 108


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 407 SSVCPLPPLCSEGPSCRAVSTQ-NGFLS 327
           S +  +PPL ++GPS     TQ  GF S
Sbjct: 309 SGITGVPPLPADGPSNPGPQTQTEGFYS 336


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 319 LGQEQGHRTGLLYSQLQSVDRLRYMREFCQ 230
           LG E G   GL++S   +V    Y+  FC+
Sbjct: 263 LGPEFGGSIGLIFSLANAVACAMYVVGFCE 292


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,740
Number of Sequences: 2352
Number of extensions: 13689
Number of successful extensions: 68
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)