Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_L07
         (664 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027939-1|AAH27939.1|  600|Homo sapiens SNED1 protein protein.        31   3.7  
BC098568-1|AAH98568.1| 1164|Homo sapiens chromosome 14 open read...    31   4.9  
AK000870-1|BAA91404.1|  614|Homo sapiens protein ( Homo sapiens ...    31   4.9  
AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein.             31   4.9  
Z97653-1|CAJ55832.1|  479|Homo sapiens F-box and leucine-rich re...    30   6.4  
BC069198-1|AAH69198.1|  452|Homo sapiens regulator of chromosome...    30   6.4  
BC036680-1|AAH36680.1|  479|Homo sapiens F-box and leucine-rich ...    30   6.4  
AF113248-1|AAF21966.1|  307|Homo sapiens heart specific serine p...    30   6.4  
AE006464-13|AAK61245.1|  581|Homo sapiens possible G-protein rec...    30   6.4  

>BC027939-1|AAH27939.1|  600|Homo sapiens SNED1 protein protein.
          Length = 600

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -3

Query: 422 GRRTLSSVCPLPPL-CSEGPSCRAVSTQNGFLSLRSWPGTRPPHRPSLFPAPICRS 258
           GR  L    PL PL C+E   CRA   +NG  S R+ PG      P+ F    C +
Sbjct: 9   GRLRLEPATPLTPLLCAERDECRAHPCRNGG-SCRNLPGAYVCRCPAGFVGVHCET 63


>BC098568-1|AAH98568.1| 1164|Homo sapiens chromosome 14 open reading
           frame 102 protein.
          Length = 1164

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 316 QERRERNPF*VETARHDGPSEQSGGSGQTDESVRRPSRGIG 438
           ++++ ++    +T R  GPS  S     TD    +PSRG+G
Sbjct: 86  KKKKRKHQHHKKTKRKHGPSSSSRSETDTDSEKDKPSRGVG 126


>AK000870-1|BAA91404.1|  614|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10008 fis, clone HEMBA1000227. ).
          Length = 614

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 316 QERRERNPF*VETARHDGPSEQSGGSGQTDESVRRPSRGIG 438
           ++++ ++    +T R  GPS  S     TD    +PSRG+G
Sbjct: 86  KKKKRKHQHHKKTKRKHGPSSSSRSETDTDSGKDKPSRGVG 126


>AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein.
          Length = 1682

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 395 PLPPLCSEGPSCRAVSTQNGFLSLRSWPGTRPPHRPSLFPAP 270
           P PP   +GP+CRA + ++G +    + GT  P RP+  P P
Sbjct: 480 PPPPAWLKGPACRA-AREDGEILEELFFGTEGPPRPAPPPLP 520


>Z97653-1|CAJ55832.1|  479|Homo sapiens F-box and leucine-rich
           repeat protein 16 protein.
          Length = 479

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
 Frame = -3

Query: 641 SIDAGTXATCTRPCLPPELPX--RFAAEGPCLTIAYGVEQCARVSAPARQVA--HPARK 477
           SI  GT AT  RPC PP  P     +   P    A     C     PA  +A  HPA +
Sbjct: 34  SITKGTPATKNRPCQPPPPPTLPPPSLAAPLSRAALAGGPCTPAGGPASALAPGHPAER 92


>BC069198-1|AAH69198.1|  452|Homo sapiens regulator of chromosome
           condensation 1 protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = +1

Query: 175 KRIGGRRTPPNQKT*KINTGKTLAYIAIDRQIGAGNREGRCGGLVPGQERR 327
           KRI  RR+PP     K    K     A  R  GA + +G CG   P Q+ R
Sbjct: 4   KRIAKRRSPPADAIPKSKKVKDTRAAASRRVPGARSCQGACGPSPPDQKTR 54


>BC036680-1|AAH36680.1|  479|Homo sapiens F-box and leucine-rich
           repeat protein 16 protein.
          Length = 479

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
 Frame = -3

Query: 641 SIDAGTXATCTRPCLPPELPX--RFAAEGPCLTIAYGVEQCARVSAPARQVA--HPARK 477
           SI  GT AT  RPC PP  P     +   P    A     C     PA  +A  HPA +
Sbjct: 34  SITKGTPATKNRPCQPPPPPTLPPPSLAAPLSRAALAGGPCTPAGGPASALAPGHPAER 92


>AF113248-1|AAF21966.1|  307|Homo sapiens heart specific serine
           proteinase protein.
          Length = 307

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +2

Query: 14  SVVMSVRFVRTILVLLAIVHNSRALVDEVVDVLKLGKEIGE 136
           SV M  RFVRTI++       SRA+VD  + +++L ++I E
Sbjct: 134 SVFMQTRFVRTIIL---HPRYSRAVVDYDISIVELSEDISE 171


>AE006464-13|AAK61245.1|  581|Homo sapiens possible G-protein
           receptor protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
 Frame = -3

Query: 641 SIDAGTXATCTRPCLPPELPX--RFAAEGPCLTIAYGVEQCARVSAPARQVA--HPARK 477
           SI  GT AT  RPC PP  P     +   P    A     C     PA  +A  HPA +
Sbjct: 66  SITKGTPATKNRPCQPPPPPTLPPPSLAAPLSRAALAGGPCTPAGGPASALAPGHPAER 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,107,400
Number of Sequences: 237096
Number of extensions: 1964767
Number of successful extensions: 5899
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5894
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)