Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_L06
         (869 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   4.1  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   5.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.5  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +2

Query: 647 FTTQTVFLIWFFFIKGVLKNFNV*IVVXIXIXVRVTQMYNLT 772
           +TT T+FL+  F         NV +V  + + +  + +Y +T
Sbjct: 244 YTTYTIFLLLIFGSGSATPENNVSVVYVLILYILESLLYMVT 285


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 59  HFKLXXXXXXQFICPRCPF 115
           H K+      +  CP+CPF
Sbjct: 220 HSKVHIREDKRLTCPKCPF 238


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +1

Query: 82  LVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATW 198
           L  +++ + SI+++  + LKT+     DKL +  + + W
Sbjct: 104 LYQVFVFRRSIYLQIKERLKTQGISHLDKLQLGQYFSPW 142


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 118 CEWTSWADKLKLKIISQ 68
           C+W   AD+ K K I Q
Sbjct: 517 CDWPEHADREKCKKIEQ 533


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,734
Number of Sequences: 336
Number of extensions: 3361
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)