Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_L03
(720 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 260 1e-69
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 260 1e-69
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 252 5e-67
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 245 5e-65
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 204 7e-53
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 178 7e-45
AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-P... 31 1.2
BT022775-1|AAY55191.1| 636|Drosophila melanogaster IP13956p pro... 29 6.4
BT022767-1|AAY55183.1| 636|Drosophila melanogaster IP13856p pro... 29 6.4
AE014296-3276|AAF49071.1| 636|Drosophila melanogaster CG7385-PA... 29 6.4
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 260 bits (638), Expect = 1e-69
Identities = 126/171 (73%), Positives = 143/171 (83%)
Frame = +2
Query: 206 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 385
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 386 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 565
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 566 TRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPRF 718
T +V+ ++L+++VNKL DSIAKDI K+C IYPL DV IRKVKVL +PRF
Sbjct: 176 TNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 226
Score = 69.7 bits (163), Expect = 4e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 100 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 240
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 260 bits (638), Expect = 1e-69
Identities = 126/171 (73%), Positives = 143/171 (83%)
Frame = +2
Query: 206 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 385
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 386 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 565
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 566 TRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPRF 718
T +V+ ++L+++VNKL DSIAKDI K+C IYPL DV IRKVKVL +PRF
Sbjct: 176 TNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 226
Score = 69.7 bits (163), Expect = 4e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 100 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 240
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 252 bits (616), Expect = 5e-67
Identities = 121/163 (74%), Positives = 136/163 (83%)
Frame = +2
Query: 230 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 409
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 410 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 589
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGAD 133
Query: 590 LREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPRF 718
L+++VNKL DSIAKDI K+C IYPL DV IRKVKVL +PRF
Sbjct: 134 LKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 176
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 245 bits (599), Expect = 5e-65
Identities = 122/173 (70%), Positives = 139/173 (80%), Gaps = 2/173 (1%)
Frame = +2
Query: 206 KIASEGLKGRVFEVSLA-DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 382
+IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYR 115
Query: 383 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCE 559
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +
Sbjct: 116 SMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTD 175
Query: 560 IITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPRF 718
IIT +V+ ++L+++VNKL DSIAKDI K+C IYPL DV IRKVKVL +PRF
Sbjct: 176 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 228
Score = 68.9 bits (161), Expect = 6e-12
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +1
Query: 100 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 240
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVF 67
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 204 bits (499), Expect = 7e-53
Identities = 97/133 (72%), Positives = 113/133 (84%)
Frame = +2
Query: 206 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 385
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 386 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 565
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 566 TRDVTNSELREVV 604
T +V+ ++L++++
Sbjct: 176 TNEVSGADLKQLL 188
Score = 69.7 bits (163), Expect = 4e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 100 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 240
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 178 bits (433), Expect = 7e-45
Identities = 84/121 (69%), Positives = 99/121 (81%)
Frame = +2
Query: 356 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 535
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 536 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 715
IR +M +IIT +V+ ++L+++VNKL DSIAKDI K+C IYPL DV IRKVKVL +PR
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPR 120
Query: 716 F 718
F
Sbjct: 121 F 121
>AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-PA
protein.
Length = 1513
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -2
Query: 278 RQCQLVDQPGKLRKLFPSILPKQFSLPWVRLT 183
+ C L+D P +LR FPS LP+ SLP + LT
Sbjct: 163 QNCPLIDSPIRLR--FPSPLPEPPSLPTITLT 192
>BT022775-1|AAY55191.1| 636|Drosophila melanogaster IP13956p
protein.
Length = 636
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 231 PFNPSEAIFVTLGTVDKRGADL-PLAEHRRSLDIVPIFASEWVDNLLLNTFFTALRQAFI 55
P++ + G + K+G+ L P+A+ R L FA+ W+ +L +F+TA AF+
Sbjct: 242 PYSLGHCAWFVYGALMKQGSTLSPIADSTRLL-----FATWWIFITILTSFYTANLTAFL 296
>BT022767-1|AAY55183.1| 636|Drosophila melanogaster IP13856p
protein.
Length = 636
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 231 PFNPSEAIFVTLGTVDKRGADL-PLAEHRRSLDIVPIFASEWVDNLLLNTFFTALRQAFI 55
P++ + G + K+G+ L P+A+ R L FA+ W+ +L +F+TA AF+
Sbjct: 242 PYSLGHCAWFVYGALMKQGSTLSPIADSTRLL-----FATWWIFITILTSFYTANLTAFL 296
>AE014296-3276|AAF49071.1| 636|Drosophila melanogaster CG7385-PA
protein.
Length = 636
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 231 PFNPSEAIFVTLGTVDKRGADL-PLAEHRRSLDIVPIFASEWVDNLLLNTFFTALRQAFI 55
P++ + G + K+G+ L P+A+ R L FA+ W+ +L +F+TA AF+
Sbjct: 242 PYSLGHCAWFVYGALMKQGSTLSPIADSTRLL-----FATWWIFITILTSFYTANLTAFL 296
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,323,780
Number of Sequences: 53049
Number of extensions: 724380
Number of successful extensions: 2108
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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