Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_K24
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117195-21|CAB55033.2| 313|Caenorhabditis elegans Hypothetical... 266 2e-71
AL117195-8|CAB55030.1| 258|Caenorhabditis elegans Hypothetical ... 259 2e-69
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 32 0.47
U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astaci... 29 5.7
Z83110-4|CAB05526.1| 88|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 28 7.6
U70853-6|ABQ13065.1| 185|Caenorhabditis elegans Hypothetical pr... 28 7.6
U70853-4|AAV34789.1| 195|Caenorhabditis elegans Hypothetical pr... 28 7.6
U70853-3|AAK77617.1| 246|Caenorhabditis elegans Hypothetical pr... 28 7.6
U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical pr... 28 7.6
U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical pr... 28 7.6
>AL117195-21|CAB55033.2| 313|Caenorhabditis elegans Hypothetical
protein Y57A10A.28 protein.
Length = 313
Score = 266 bits (651), Expect = 2e-71
Identities = 115/250 (46%), Positives = 171/250 (68%)
Frame = +3
Query: 123 TMDPESFLDLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTML 302
++D ++ +D V KLK+YPYFD AH +L L+VR DLG A +FSRKHP SCWLS ML
Sbjct: 9 SIDHDTLIDAGGYVQKLKLYPYFDAAHYVLTCLSVRHDLGPDAISFSRKHPFSCWLSCML 68
Query: 303 VIFAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAA 482
+ FAG ++ LLGEPI++PLK +++G++ WYLVFY+PFDV +++A + PVK+ +
Sbjct: 69 MSFAGSFLSCFLLGEPIISPLKQHADILLGSIVWYLVFYSPFDVVFRLATWFPVKLGLSV 128
Query: 483 MKEIYRAKKVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMET 662
+KE+ R K+ GV HA ++YP +Y++ ++VG KG G+G K+VE+L RG W PT E
Sbjct: 129 LKEVQRTHKIAAGVKHAVRIYPESYLVQILVGVAKGAGSGVVKIVEQLARGTWHPTNHEI 188
Query: 663 MQPSFYTKASLVASVIFVLDKKTDLISAPHALXXXXXXXXXXXXKLSSILLGIHDPFVPF 842
++PSF TKA ++AS++F L++ + ++APH L KL+S+ L +HD +P
Sbjct: 189 LRPSFTTKACVIASIVFTLERHSMYVTAPHDLVYLCVVGFFIYFKLASLCLSVHDVLMPI 248
Query: 843 XNLFCALFMG 872
N+ CA+FMG
Sbjct: 249 ENVLCAVFMG 258
>AL117195-8|CAB55030.1| 258|Caenorhabditis elegans Hypothetical
protein Y57A10A.10 protein.
Length = 258
Score = 259 bits (635), Expect = 2e-69
Identities = 117/218 (53%), Positives = 152/218 (69%)
Frame = +3
Query: 219 LAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMVANGLLGEPILAPLKNTPQLVIGTV 398
+ VR+DLGS A FSRKHPLSCWLS+ML+ FA +AN LLGEP++AP K +++ T+
Sbjct: 3 IEVRDDLGSAASIFSRKHPLSCWLSSMLMCFADAFLANFLLGEPVIAPFKRHDDIILATI 62
Query: 399 TWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAKKVYDGVSHAAKLYPNAYVIMVIVG 578
WYLVFY PFD YK+AK PVK V A MKE+ RA KV GVSHAAKLYPN+Y++ V+VG
Sbjct: 63 IWYLVFYAPFDGIYKIAKITPVKCVLAVMKEVKRAYKVSHGVSHAAKLYPNSYIVQVLVG 122
Query: 579 TLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTKASLVASVIFVLDKKTDLISAPHAL 758
T KG G+G + +E+L+RG W PT E ++PSF TKA +VA+ + L+K ++APH L
Sbjct: 123 TAKGAGSGIVRTLEQLVRGVWLPTHNELLRPSFATKACVVAASVLALEKSGTYLTAPHDL 182
Query: 759 XXXXXXXXXXXXKLSSILLGIHDPFVPFXNLFCALFMG 872
KLS+++L + DPF P NLFCA+FMG
Sbjct: 183 VYLVIVGFFVYFKLSAVILHVTDPFAPIENLFCAIFMG 220
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +3
Query: 18 RPRLVACVRLLITLLSVFSCTIKLQYNGEIEQKTNTMDPESFLDLANQVIKLKMYPYFDI 197
R RL ++ ++ +F+C IKL+ + +KT+ + F D+++ + +M +D+
Sbjct: 2 RKRLTQAQKMFPQIIVIFNCQIKLKLIAKETKKTHDISGMFFQDVSSLTMNSRMVVPYDL 61
Query: 198 AH 203
A+
Sbjct: 62 AN 63
>U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astacin
protease protein 7 protein.
Length = 382
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 450 KFLPVKVVAAAMKEIYRAKK-VYDGVSHAAKLYPNAYV 560
K +PV+VV +I ++ +GVS AAKL+PNA +
Sbjct: 57 KHIPVEVVNDFKSDIRLPRRHKRNGVSRAAKLWPNARI 94
>Z83110-4|CAB05526.1| 88|Caenorhabditis elegans Hypothetical
protein F57C2.4 protein.
Length = 88
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 297 MLVIFAGGMVANGLLGEPI 353
++V AGG+VA+G+ GEPI
Sbjct: 9 LVVALAGGIVAHGIKGEPI 27
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -2
Query: 384 LIGVYSSTAPKWVRLEDHWLPYRRRI--SLA*WTASMTVDASWKRPGH 247
+ Y ST W D+WL RR S WT VD W +PG+
Sbjct: 136 IAATYVSTG--WFPYMDNWLGLRRSCDNSTYIWTDGTPVDYLWWQPGY 181
>U70853-6|ABQ13065.1| 185|Caenorhabditis elegans Hypothetical
protein M01H9.3d protein.
Length = 185
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 373 VFFNGAKMGSPRRPLATIPPANITSIVDSQHDSGCFLEKAWAPDPKSS 230
V F GSP P A+IP A + +D+ C W P +S+
Sbjct: 16 VTFKAVTGGSPHSPSASIPIAGADDSIRPDYDTDCL----WKPPTRSA 59
>U70853-4|AAV34789.1| 195|Caenorhabditis elegans Hypothetical
protein M01H9.3c protein.
Length = 195
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 373 VFFNGAKMGSPRRPLATIPPANITSIVDSQHDSGCFLEKAWAPDPKSS 230
V F GSP P A+IP A + +D+ C W P +S+
Sbjct: 26 VTFKAVTGGSPHSPSASIPIAGADDSIRPDYDTDCL----WKPPTRSA 69
>U70853-3|AAK77617.1| 246|Caenorhabditis elegans Hypothetical
protein M01H9.3a protein.
Length = 246
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 373 VFFNGAKMGSPRRPLATIPPANITSIVDSQHDSGCFLEKAWAPDPKSS 230
V F GSP P A+IP A + +D+ C W P +S+
Sbjct: 77 VTFKAVTGGSPHSPSASIPIAGADDSIRPDYDTDCL----WKPPTRSA 120
>U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical
protein B0252.3c protein.
Length = 464
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 636 AWTPTAMETMQPSFYTKASLVASVIFVLDK 725
AW+P A + PSF KAS +S I V D+
Sbjct: 33 AWSPLAFTGLCPSFVVKASENSSFIGVADE 62
>U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical
protein B0252.3b protein.
Length = 484
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 636 AWTPTAMETMQPSFYTKASLVASVIFVLDK 725
AW+P A + PSF KAS +S I V D+
Sbjct: 53 AWSPLAFTGLCPSFVVKASENSSFIGVADE 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,607,770
Number of Sequences: 27780
Number of extensions: 446881
Number of successful extensions: 1142
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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