Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_K22
         (869 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   8.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   8.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   8.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.5  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 766 LYNSYNAESRFIYRYSNIGL 707
           L + YN E++ IY   +IGL
Sbjct: 210 LNHDYNLENKLIYFIEDIGL 229


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 636 IRPYGVFEFSMHKTQTINKCRKVTVSIFTKSLYSAV 529
           I P G   F   + Q I KC    +S     LY+A+
Sbjct: 648 IEPPGTRFFYPDRKQVILKCNIQDMSFLFSQLYNAL 683


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 303 IWRIFPHFGYSERFM*LLDRQQHSQRFFSDCLP 401
           IW +  +  +   F+ ++  Q  S R F+ C+P
Sbjct: 7   IWTLAVNVLFVNSFLFVIAAQDSSGRIFTICVP 39


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 303 IWRIFPHFGYSERFM*LLDRQQHSQRFFSDCLP 401
           IW +  +  +   F+ ++  Q  S R F+ C+P
Sbjct: 7   IWTLAVNVLFVNSFLFVIAAQDSSGRIFTICVP 39


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 303 IWRIFPHFGYSERFM*LLDRQQHSQRFFSDCLP 401
           IW +  +  +   F+ ++  Q  S R F+ C+P
Sbjct: 7   IWTLAVNVLFVNSFLFVIAAQDSSGRIFTICVP 39


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 636 IRPYGVFEFSMHKTQTINKCRKVTVSIFTKSLYSAV 529
           I P G   F   + Q I KC    +S     LY+A+
Sbjct: 738 IEPPGTRFFYPDRKQVILKCNIQDMSFLFSQLYNAL 773


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,545
Number of Sequences: 438
Number of extensions: 5616
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)