Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_K20
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical pr... 29 2.9
U40414-3|AAA81406.1| 321|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL132898-21|CAC14418.2| 617|Caenorhabditis elegans Hypothetical... 29 3.9
AL132863-12|CAC15862.2| 617|Caenorhabditis elegans Hypothetical... 29 3.9
AF160189-1|AAD45355.1| 617|Caenorhabditis elegans putative seri... 29 3.9
AF039048-9|AAB94233.1| 362|Caenorhabditis elegans Hypothetical ... 28 6.8
AF039048-8|AAT68896.1| 367|Caenorhabditis elegans Hypothetical ... 28 6.8
AF100659-1|AAC68963.1| 232|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 297 CASVPPGTATRAGXTRCSQNKPP 229
C +V PG R+G RC+ N+PP
Sbjct: 74 CEAVWPGAYCRSGECRCANNQPP 96
>Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical
protein T02D1.6 protein.
Length = 433
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 501 CRFLVTFQLSGLAVSSVVGAWSWGPTSAS-PQVSGEXGEVASAGPGTAQPGRVYV 340
C F+++ L + SV+G W +G T V G G +AS TA YV
Sbjct: 113 CDFVMSLSLPPAILDSVIGFWIFGTTMCKVHHVFGSVGRIASTFLITAMSFDRYV 167
>U40414-3|AAA81406.1| 321|Caenorhabditis elegans Hypothetical
protein F53B3.6 protein.
Length = 321
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 575 HHEGCGRTTHQSDGGIVVPGXRDPG 649
H +G R + +DGG+V+P RD G
Sbjct: 95 HDDGFHRNEYPNDGGVVIPIRRDIG 119
>AL132898-21|CAC14418.2| 617|Caenorhabditis elegans Hypothetical
protein Y59A8B.14 protein.
Length = 617
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 278 PGGTDAQXXXXXXXXXXDEPSTXTRPGCAVPGPA-----DATSPXSPDTCGLALVGPQDQ 442
P G + PS+ + P CA PGPA ++T+ +T G+A D
Sbjct: 531 PDGVEGSEDSAAPLGPQRRPSSRSMPTCAPPGPAAGNAQNSTAENGAETDGVA--SASDP 588
Query: 443 APTTLDTANP 472
PT A P
Sbjct: 589 PPTAAPGAPP 598
>AL132863-12|CAC15862.2| 617|Caenorhabditis elegans Hypothetical
protein Y59A8B.14 protein.
Length = 617
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 278 PGGTDAQXXXXXXXXXXDEPSTXTRPGCAVPGPA-----DATSPXSPDTCGLALVGPQDQ 442
P G + PS+ + P CA PGPA ++T+ +T G+A D
Sbjct: 531 PDGVEGSEDSAAPLGPQRRPSSRSMPTCAPPGPAAGNAQNSTAENGAETDGVA--SASDP 588
Query: 443 APTTLDTANP 472
PT A P
Sbjct: 589 PPTAAPGAPP 598
>AF160189-1|AAD45355.1| 617|Caenorhabditis elegans putative
serine-threonine kinasePAR-4 protein.
Length = 617
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 278 PGGTDAQXXXXXXXXXXDEPSTXTRPGCAVPGPA-----DATSPXSPDTCGLALVGPQDQ 442
P G + PS+ + P CA PGPA ++T+ +T G+A D
Sbjct: 531 PDGVEGSEDSAAPLGPQRRPSSRSMPTCAPPGPAAGNAQNSTAENGAETDGVA--SASDP 588
Query: 443 APTTLDTANP 472
PT A P
Sbjct: 589 PPTAAPGAPP 598
>AF039048-9|AAB94233.1| 362|Caenorhabditis elegans Hypothetical
protein F16B4.2a protein.
Length = 362
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 543 LRKQVHXKLDNTM-KVVDEQRIRVMEGSWSPVXVIREIVE 659
LR+++H L K V E+R+ ++ S+ PV + RE+V+
Sbjct: 2 LRRRIHEILSRKFPKWVFEERLEPLDWSFLPVEIRREVVK 41
>AF039048-8|AAT68896.1| 367|Caenorhabditis elegans Hypothetical
protein F16B4.2b protein.
Length = 367
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 543 LRKQVHXKLDNTM-KVVDEQRIRVMEGSWSPVXVIREIVE 659
LR+++H L K V E+R+ ++ S+ PV + RE+V+
Sbjct: 2 LRRRIHEILSRKFPKWVFEERLEPLDWSFLPVEIRREVVK 41
>AF100659-1|AAC68963.1| 232|Caenorhabditis elegans Hypothetical
protein F58E2.5 protein.
Length = 232
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 369 GTAQPGRVYVEXXXXXXXXXXXXGCASVPPGTATRAGXTRCS 244
G A+PGR E C++ PP T+ R CS
Sbjct: 191 GGAEPGRFIKELDDYVPRYKEGKACSACPPPTSCRGSSVLCS 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,975,144
Number of Sequences: 27780
Number of extensions: 316650
Number of successful extensions: 739
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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