Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_K17
         (830 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2338|AAF57956.3|  600|Drosophila melanogaster CG5348-PA...    29   7.8  

>AE013599-2338|AAF57956.3|  600|Drosophila melanogaster CG5348-PA
           protein.
          Length = 600

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 618 CMEDTNKLQYMLVKCISIKYKN-LR*DIQLNLKKIVCFQIILL*ITTKNVHKSNVSKLRN 794
           C   TN + YM +    +K  N  +  I + L    CFQI++L I T NV+ S   K  +
Sbjct: 54  CNSSTNVIPYMRLLACDLKCINQFQEMIFIALFVAFCFQILVLLIYTINVYYSPALKAVS 113

Query: 795 R 797
           R
Sbjct: 114 R 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,148,441
Number of Sequences: 53049
Number of extensions: 603025
Number of successful extensions: 989
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)