Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_K14
         (678 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...   145   3e-35
05_03_0281 + 11560402-11560569,11561373-11561579,11562966-115631...    37   0.017
01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010           36   0.030
07_03_1165 - 24459156-24460139                                         34   0.12 
09_04_0210 + 15644151-15644609                                         30   1.5  
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242...    30   2.0  
08_02_0666 - 19823490-19823822,19823912-19824185,19824311-19826292     28   6.0  
12_02_0397 + 18581301-18581561,18581584-18581676                       28   7.9  

>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score =  145 bits (351), Expect = 3e-35
 Identities = 58/87 (66%), Positives = 74/87 (85%)
 Frame = +2

Query: 167 MGRKKKKASKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 346
           MG+KKK+  K +C+YC+REFDDEKIL+QHQKAKHFKCH+CHKKL T  G++IH +QVHKE
Sbjct: 1   MGKKKKRVEKVFCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKE 60

Query: 347 AIDKVPNSLPNRSNIEIXIYGMEGIPP 427
           ++ KVPN+ P R + EI I+GM+GIPP
Sbjct: 61  SVTKVPNAKPERESTEIEIFGMQGIPP 87


>05_03_0281 +
           11560402-11560569,11561373-11561579,11562966-11563174,
           11563261-11563309,11563611-11563673,11563799-11565472
          Length = 789

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 188 ASKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKK 295
           A  P C +C   F  +  L  H   +H+ CHIC ++
Sbjct: 161 AGHPMCEFCRSSFYGDNELYTHMSREHYSCHICQRQ 196


>01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010
          Length = 613

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +2

Query: 197 PWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 340
           P C +C   F  +  L  H   +HF CHIC +       LS    Q H
Sbjct: 145 PMCEFCKSPFYGDNELYTHMTREHFSCHICQRYSARLQSLSYLVRQQH 192


>07_03_1165 - 24459156-24460139
          Length = 327

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 227 DDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSLP 376
           DD+   +  ++   F CH+C+K+  +   +  H M+VH    +K P SLP
Sbjct: 99  DDDAAPVAARREASFPCHLCNKEFGSRKAVHGH-MRVHHAENEKEPMSLP 147


>09_04_0210 + 15644151-15644609
          Length = 152

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 203 CWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIH 325
           C YC+R+FD  + L  HQ A  ++  +  ++      L  H
Sbjct: 36  CMYCDRKFDSSQALGGHQNAHKYERSLAKRRREIAAALRAH 76


>02_05_0473 +
           29319824-29322511,29322659-29322820,29324133-29324249,
           29324360-29324469,29324504-29324540,29324696-29324862,
           29325002-29325089,29325163-29325270
          Length = 1158

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +2

Query: 221 EFDDEKILIQHQKAKH----FKCHICHKKLYTGPGLSIHCMQVHKEAI 352
           E  D  +++  +   H     KC IC ++     GL +H  +VHK+ +
Sbjct: 443 ENQDGSVMVLREDGTHPSPGLKCKICSQEFSDDQGLGLHWTEVHKKEV 490


>08_02_0666 - 19823490-19823822,19823912-19824185,19824311-19826292
          Length = 862

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -2

Query: 623 HXXMXRIHSWWHWPHGCGQYPR*HCRRACTQQCWSSFFLGSWFIIITVRP 474
           H    R HS  +W H   Q     C+   +++CW+  F G  F +I + P
Sbjct: 522 HYRYVRSHSVAYWAHSFAQDLERACKDHYSRRCWAIGF-GLNFRVIALSP 570


>12_02_0397 + 18581301-18581561,18581584-18581676
          Length = 117

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -1

Query: 243 RIFSSSNSLLQYQHQGLDAFFFF 175
           R+F++ N+++Q QH  L A+F F
Sbjct: 86  RMFANINNMMQQQHDDLQAYFRF 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,349,739
Number of Sequences: 37544
Number of extensions: 287299
Number of successful extensions: 815
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)