Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_K13
(776 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC24B10.21 |tpi1|tpi|triosephosphate isomerase|Schizosaccharom... 238 7e-64
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 33 0.046
SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 29 0.74
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 27 2.3
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 27 4.0
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 26 5.2
SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2 |Schizosacc... 26 6.9
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 26 6.9
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 25 9.2
SPAC9.12c |atp12||F1-ATPase chaperone Atp12 |Schizosaccharomyces... 25 9.2
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 25 9.2
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 25 9.2
>SPCC24B10.21 |tpi1|tpi|triosephosphate
isomerase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 249
Score = 238 bits (582), Expect = 7e-64
Identities = 117/237 (49%), Positives = 151/237 (63%), Gaps = 1/237 (0%)
Frame = +1
Query: 67 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDP-NVEVIVGVPAIYLSYVKTIIPDNVE 243
M RKF VGGN+KMNG + I+ L L+ +VE ++ +YL + + ++
Sbjct: 1 MARKFFVGGNFKMNGSLESMKTIIEGLNTTKLNVGDVETVIFPQNMYLITTRQQVKKDIG 60
Query: 244 VAAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESG 423
V AQN + GA+TGE S + D G+ + + GHSERRTIF E DE VA+K ALE G
Sbjct: 61 VGAQNVFDKKNGAYTGENSAQSLIDAGITYTLTGHSERRTIFKESDEFVADKTKFALEQG 120
Query: 424 LKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQ 603
L V+ACIGETL ERE+ +T VV RQL A+ + W IV+AYEPVWAIGTGKTATP+
Sbjct: 121 LTVVACIGETLAEREANETINVVVRQLNAIADKV-QNWSKIVIAYEPVWAIGTGKTATPE 179
Query: 604 QAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLXGGASL 774
QAQ+VH +R W + + SV++ +R+ YGGSV N KE DIDGFL GGASL
Sbjct: 180 QAQEVHAEIRKWATNKLGASVAEGLRVIYGGSVNGGNCKEFLKFHDIDGFLVGGASL 236
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 33.1 bits (72), Expect = 0.046
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = -3
Query: 375 FTKNCSSFRMTKYNPIYSNVFDHSG*NFTSKSSFWRLPTVLGCNFDIIRNDSLH 214
F + ++ TK N + SN+F+H+ + T +SS T L IIRNDS H
Sbjct: 26 FHSSVANIHFTKENNLKSNIFEHNNNSPTLRSSSVACNTCL----KIIRNDSFH 75
>SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 29.1 bits (62), Expect = 0.74
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 556 YEPVWAIGTGKT--ATPQQAQDVHHALRNWLSANVSGSVSDAVRI 684
Y +W++G TP+ + VH LR WL V G DA+ +
Sbjct: 172 YLHLWSVGQPDLNWETPKVREAVHDILRFWLDRGVDGFRLDAINM 216
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 667 SDAVRIQYGGSVTAANAKELASCKDIDGFLXG 762
SD R Q+G S+ +NAKEL I G+ G
Sbjct: 259 SDLSRGQHGKSIILSNAKELYKSVGIRGYYRG 290
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -3
Query: 699 RATVLNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNS 571
+AT + + Y P +G K + LSL + ++ C NS
Sbjct: 165 KATKFPHFGILYHPESVGSSKSLKIFKNFLSLADTPNIQCVNS 207
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 631 EEHGGHLEPVGE*QSCLYQ*PIQVHRQAQYFP 536
+ +GG+L P E S ++ PI++ R A Y+P
Sbjct: 69 KSYGGNLAPFDEEFSFHFRGPIELKRFAVYYP 100
>SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 849
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -1
Query: 602 WGVAVLPVPIAHTGS*ASTIFSHLSPMADTKAFNCLKTTSSVLPDSLSSRVSPIQAMTF 426
+ + +LP I S A +F +P ++ F CL + +L L+S V +Q ++
Sbjct: 226 YSLFLLPRLIRKQLSDAPIVFFLHAPFCTSEVFRCLSKRAEILKGVLASNVIAMQTDSY 284
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 530 SPMADTKAFN-CLKTTSSVLPDSLSSRVSP 444
SP+ TK+FN L ++SS+L + S SP
Sbjct: 220 SPLTKTKSFNDALTSSSSILKPCMPSIASP 249
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 232 DNVEVAAQNCWKSPKGAFTGEISPA 306
D E A+ SP G+FT +ISPA
Sbjct: 752 DGHEQASPLVSSSPSGSFTSQISPA 776
>SPAC9.12c |atp12||F1-ATPase chaperone Atp12 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 287
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 601 QQAQDVHHALRNWLSA 648
+Q Q+ H +RNWLS+
Sbjct: 186 KQTQETHERIRNWLSS 201
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 25.4 bits (53), Expect = 9.2
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -3
Query: 321 NVFDHSG*NFTSKSSFWRLPTVLGCNFDIIRNDSLHIRQVNSRNTNNYLNIRI*RSLF*I 142
N+FD + KS F + N +I DS ++ NT N SLF
Sbjct: 193 NIFDLDSGKWVFKSLFNHHCGIYRSNCVVINKDSEFLQMCRPINTTQDSNEHSIGSLFFY 252
Query: 141 INY-FVDLIFVTIHL 100
+NY FV++ I+L
Sbjct: 253 LNYNFVNVKRQVIYL 267
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 9.2
Identities = 23/83 (27%), Positives = 33/83 (39%)
Frame = +1
Query: 52 NKITEMGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIP 231
+ I E+ R+ + WK+ K + E+ K+G L +EV A +S VK I
Sbjct: 279 DSILEICRERLAPKGWKITEGKYSMKEVAQASKEGRL---LEVFGAGTAALVSPVKAINY 335
Query: 232 DNVEVAAQNCWKSPKGAFTGEIS 300
E G T EIS
Sbjct: 336 KGTEYEIPMPEGQEAGPITSEIS 358
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,275,085
Number of Sequences: 5004
Number of extensions: 71359
Number of successful extensions: 238
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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