Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_K10
(753 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr ... 276 3e-75
SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|ch... 43 5e-05
SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 32 0.076
SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizos... 30 0.41
SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|... 27 2.2
SPAC4G9.13c |vps26|pep8|retromer complex subunit Vps26|Schizosac... 27 2.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.8
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 26 5.0
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 5.0
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 26 5.0
SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces... 26 5.0
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 26 6.6
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 8.8
SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 8.8
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 25 8.8
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 25 8.8
SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 8.8
>SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 335
Score = 276 bits (676), Expect = 3e-75
Identities = 125/188 (66%), Positives = 153/188 (81%), Gaps = 1/188 (0%)
Frame = +1
Query: 187 LKRPKTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGGKDSTVLAHTLKTLN 366
L RPKTG ICKECF++ FETEIH I + KLF +G+ V + ASGGKDSTVLA+ +K LN
Sbjct: 16 LVRPKTGQKICKECFYYVFETEIHNVIIENKLFVRGERVGIGASGGKDSTVLAYVMKLLN 75
Query: 367 ERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMPLKILSYKDLY-GWTMDEIVAQ 543
ERY+YGL L L+S+DEGI GYRDDSL+TVK+N+ Y +P+KI+SY DLY GWTMD +VA+
Sbjct: 76 ERYDYGLELYLISVDEGIRGYRDDSLDTVKRNQQQYGLPMKIVSYADLYDGWTMDNVVAR 135
Query: 544 IGRKNNCTFCGVFRRQALDRGAAMLNVKCIATGHNADDIAETVLMNVLRGDIARLKRCTA 723
IG KNNCT+CGVFRRQALDR A L++ + TGHNADDIAET+LMN+LRGD+ARL R T
Sbjct: 136 IGTKNNCTYCGVFRRQALDRAALSLDIHHLVTGHNADDIAETILMNLLRGDVARLPRSTE 195
Query: 724 ITTGSEGT 747
ITT S+ +
Sbjct: 196 ITTQSDSS 203
>SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 42.7 bits (96), Expect = 5e-05
Identities = 35/130 (26%), Positives = 58/130 (44%)
Frame = +1
Query: 301 VAVAASGGKDSTVLAHTLKTLNERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEM 480
+ +A SGG DS +L+ +K + + + +D I R +S E Q +
Sbjct: 25 LGIAVSGGVDSMLLSWFMKESQIMFGWPNQFIAFVVDHRI---RKNSTEEALQTIWNLNR 81
Query: 481 PLKILSYKDLYGWTMDEIVAQIGRKNNCTFCGVFRRQALDRGAAMLNVKCIATGHNADDI 660
L Y ++ W D++ + + T R Q L R N++ I T H+A+D
Sbjct: 82 MLIPNVYLNI-NWGNDDVHSLTNLE---TIAREHRYQVLTRACITHNIRHICTAHHANDQ 137
Query: 661 AETVLMNVLR 690
AET+ M +LR
Sbjct: 138 AETIFMRLLR 147
>SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 320
Score = 32.3 bits (70), Expect = 0.076
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -3
Query: 247 FRMPKKNILYKLRPLFSASSELHYFRNPSYK 155
+ +PK++ILY++R LF+ SS HY +N S K
Sbjct: 284 YSLPKQSILYEIR-LFAMSSLWHYEKNKSIK 313
>SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 29.9 bits (64), Expect = 0.41
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 214 ICKECFFWAFETEIHYTITK-GKLFNKGDSVAVAASGGKDSTVLAHTLK-TLNERYN 378
IC W+ E + I + K+ D V A SGG DSTV + LK + +R++
Sbjct: 209 ICHAKPNWSMENFVDKEILRIRKMIGPSDHVIGAVSGGVDSTVASKVLKEAIGDRFH 265
>SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 577 HHKMYNYFFFQFVPLFHPL-STHINPCKKVF*AAFHN 470
HH +NY + QF LF L S++ P +++F A N
Sbjct: 261 HHMYFNYNYGQFFTLFDRLCSSYRQPDQELFDAELRN 297
>SPAC4G9.13c |vps26|pep8|retromer complex subunit
Vps26|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 27.1 bits (57), Expect = 2.9
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +1
Query: 244 ETEIHYTITKGKLFNKGDSVAVAASGGKDSTVLAHTLKTLNERYNYGLNLMLLSIDEGIT 423
ET + I G N+G+++ + + L T + +N++++ L L+ +DE
Sbjct: 224 ETITRFQIMDGNP-NRGETIPLRMF--LNGYALTPTFRDVNKKFSVRYYLSLILVDEDQR 280
Query: 424 GYRDDSLETVKQNRDDYE 477
Y S T+ + RD++E
Sbjct: 281 RYFKQSEITLWRRRDEHE 298
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 406 IDEGITGYRDDSLETVKQNRDDYEMPLKILSYKDL 510
++ GY DD + K N +P +SYKDL
Sbjct: 662 VEAEFLGYSDDKIHLHKTNGVKISVPSAKMSYKDL 696
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 26.2 bits (55), Expect = 5.0
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +1
Query: 343 AHTLKTLNERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMPLKILSYKDLYGWT 522
A LK +RY ++ LL IDE + ++LE + R D +M +I + L GW
Sbjct: 20 AEDLKIFIKRYERSVDSTLLEIDEN----KREALEKYIEER-DRKMKYEIECNERLQGWK 74
Query: 523 MDEIVAQIGRKNN 561
I +I + +
Sbjct: 75 KLAIEREISEEQS 87
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 343 AHTLKTLNERYNYGLNLMLLSIDE 414
A T+K L E++N G++ LLS DE
Sbjct: 1111 ASTIKHLKEQFNEGVDYDLLSSDE 1134
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 26.2 bits (55), Expect = 5.0
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +1
Query: 343 AHTLKTLNERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMPLKILSYKDLYGWT 522
A LK +RY ++ LL IDE + ++LE + R D +M +I + L GW
Sbjct: 20 AEDLKIFIKRYERSVDSTLLEIDEN----KREALEKYIEER-DRKMKYEIECNERLQGWK 74
Query: 523 MDEIVAQIGRKNN 561
I +I + +
Sbjct: 75 KLAIEREISEEQS 87
>SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 366
Score = 26.2 bits (55), Expect = 5.0
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 169 CGNNAVLKRPKTGDAICKECFFWAFETEI--HYTITKGKL-FNKGDSVAVAASGGKDSTV 339
C N A + DA+C CF E +I + + + L K +A SGG S
Sbjct: 17 CDNKATVLTKS--DAVCDSCFVRRIENKIRRQFELVRPNLQGRKSKRAMLAISGGISSMA 74
Query: 340 LAHTLKTLNE 369
+ T L++
Sbjct: 75 MLETANYLSK 84
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 371 RSLRVLSVCARTVESLPPEAATATESPLLNNL 276
RSLR L +C R +S PP+ + N L
Sbjct: 733 RSLRTLGLCYRVFDSWPPKDIPTNDEDSSNPL 764
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 25.4 bits (53), Expect = 8.8
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +1
Query: 439 SLETVKQNRDDYEMPLKILSYKDLYGWTMDEI 534
+LET+++ D L++L Y L+ W + +
Sbjct: 2694 TLETLRREEDSLLSVLEVLRYDPLFSWLISPL 2725
>SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 416
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -2
Query: 350 VCARTVESLPPEAATATESPLLNNLPFVMV**ISVSNAQKKHSLQIASP 204
+ + TVE + P A T TE+ LPF ++ ++ +++I SP
Sbjct: 112 ITSGTVEIVEPTAGTVTETITSGTLPFTTT--LAQASGTVSGTVEIVSP 158
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/33 (33%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 583 RRQALDRGAAMLNVK-CIATGHNADDIAETVLM 678
R ++L+R +++ CI+TGH+A++I + L+
Sbjct: 459 RVESLERVKVQPSLRICISTGHSAEEIEKLALL 491
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 25.4 bits (53), Expect = 8.8
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 75 SEKSVVNQKTKSNAVXXXXXSH*NASAL*EGLRK*CSSEEAENRGRNL*RMFFLGIRNRN 254
S+KS+ N +KS+ V ASA K ++ R+L ++ +G +R+
Sbjct: 423 SKKSLRND-SKSDDVGNSTHRFSTASAASTSAVKTEKEKKMSAPRRSLDKLIRIGSLHRH 481
Query: 255 SLHHHKRQIIQ 287
HHHK +I+
Sbjct: 482 HHHHHKTDLIE 492
>SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 416
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -2
Query: 350 VCARTVESLPPEAATATESPLLNNLPFVMV**ISVSNAQKKHSLQIASP 204
+ + TVE + P A T TE+ LPF ++ ++ +++I SP
Sbjct: 112 ITSGTVEIVEPTAGTVTETITSGTLPFTTT--LAQASGTVSGTVEIVSP 158
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,241,122
Number of Sequences: 5004
Number of extensions: 70137
Number of successful extensions: 219
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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